Job Description C6Y4C0 Confidence 99.77% Date Sun Jul 8 11:45:08 BST 2012 Rank 71 Aligned Residues 93 % Identity 15% Template c2dhgA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:trna selenocysteine associated protein (secp43); PDBTitle: solution structure of the c-terminal rna recognition motif2 in trna selenocysteine associated protein Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.
Predicted Secondary structure																																		.																																											.
Query SS confidence																																		.																																											.
Query Sequence		P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	.	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	.	I	G	N	D
Query Conservation																																		.																																											.
Alig confidence																																		.																																											.
Template Conservation
Template Sequence		G	S	S	G	S	S	G	P	E	Y	S	L	F	V	G	D	L	T	P	D	V	D	D	G	M	L	Y	E	F	F	V	K	V	Y	P	S	C	R	G	G	K	V	V	L	D	Q	T	G	V	S	K	G	Y	G	F	V	K	F	T	D	E	L	E	Q	K	R	A	L	T	E	C	Q	G	A	V	G	L	G	S	K
Template Known Secondary structure							S	S												T	T															T	T										T	T												S												T	T	T			S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	F	V	E	W	A	K	S	R	E	R	Y	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	R	L	S	V	A	I	P	K	A	S	R	V	K
Template Known Secondary structure							B						S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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