Job Description C6Y4C0 Confidence 99.63% Date Sun Jul 8 11:45:08 BST 2012 Rank 192 Aligned Residues 95 % Identity 15% Template c2dhaA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:flj20171 protein; PDBTitle: solution structure of the second rna recognition motif in2 hypothetical protein flj201171 Resolution UNK

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	.	.	.	.	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V
Query Conservation																																		.	.	.	.
Alig confidence																																		.	.	.	.																															.
Template Conservation																																																																				.
Template Sequence		E	N	Q	V	I	V	R	M	R	G	L	P	F	T	A	T	A	E	E	V	V	A	F	F	G	Q	H	C	P	I	T	G	G	K	E	G	I	L	F	V	T	Y	P	D	G	R	P	T	G	D	A	F	V	L	F	A	C	E	E	Y	A	Q	N	A	L	R	.	K	H	K	D	L	L	G	K	R	Y	I	E	L
Template Known Secondary structure			S								S			T	T												T	T	S			T	T	G	G	G	G							T	T	S											S	S									T	.	T	T	T			S	S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	A	K	S	R	E	R	Y	H	R	D	D	K	R	R	L	S	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	S	T	A	A	E	V	Q	Q	V	L	N	R	F	S	S	A	S	G
Template Known Secondary structure																	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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