Job Description C6Y4C0 Confidence 99.75% Date Sun Jul 8 11:45:08 BST 2012 Rank 94 Aligned Residues 86 % Identity 23% Template c2dh9A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m Resolution UNK

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		S	S	G	S	S	G	I	F	V	R	N	L	P	F	D	F	T	W	K	M	L	K	D	K	F	N	E	C	G	H	V	L	Y	A	D	I	K	M	E	.	N	G	K	S	K	G	C	G	V	V	K	F	E	S	P	E	V	A	E	R	A	C	R	M	M	N	G	M	K	L	S	G	R	E	I	D	V	R	I	D
Template Known Secondary structure			S									S			T	T												T	T	S											.	T	T				S							S	S											T	T	T			T	T	S
Template Predicted Secondary structure																																									.
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.		.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.
		94	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	R	E	R	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	A	S	G	P	S
Template Known Secondary structure		T	T		S		S
Template Predicted Secondary structure
Template SS confidence
		613	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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