Job Description C6Y4C0 Confidence 99.74% Date Sun Jul 8 11:45:08 BST 2012 Rank 119 Aligned Residues 90 % Identity 20% Template c2dgwA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:probable rna-binding protein 19; PDBTitle: solution structure of the second rna recognition motif in2 rna-binding protein 19 Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I
Query Conservation
Alig confidence																																						.																																.
Template Conservation																																						.																																.
Template Sequence		S	S	G	S	S	G	T	T	C	H	T	V	K	L	R	G	A	P	F	N	V	T	E	K	N	V	M	E	F	L	A	P	L	K	P	V	.	A	I	R	I	V	R	N	A	H	G	N	K	T	G	Y	I	F	V	D	F	S	N	E	E	E	V	K	Q	A	L	K	.	C	N	R	E	Y	M	G	G	R	Y	I
Template Known Secondary structure																				S	S											T	T	S			S	.								T	T	S											S	S										.	S		S				T	T
Template Predicted Secondary structure																																						.																																.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.
		89	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	E	W	A	K	S	R	E	R	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	F	R	E	K	S	G	P	S	S	G
Template Known Secondary structure							S	S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions