Job Description C6Y4C0 Confidence 99.77% Date Sun Jul 8 11:45:08 BST 2012 Rank 78 Aligned Residues 98 % Identity 22% Template c2dguA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein q; PDBTitle: solution structure of the rna binding domain in2 heterogeneous nuclear ribonucleoprotein q Resolution UNK

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.
Template Sequence		G	S	S	G	S	S	G	M	A	K	V	K	V	L	F	V	R	N	L	A	N	T	V	T	E	E	I	L	E	K	A	F	S	Q	F	G	K	L	E	R	V	K	.	.	.	.	.	.	.	K	L	K	D	Y	A	F	I	H	F	D	E	R	D	G	A	V	K	A	M	E	E	M	N	G	K	D	L	E	G	E
Template Known Secondary structure																						T	T														S							.	.	.	.	.	.	.			S	S							S	S												T	T				T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.								.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	F	V	E	W	A	K	S	R	E	R	Y	H	R	D	D	K	R	R	L	S	N	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	E	I	V	F	A	K	P	P	D	Q	K	R	K	E	R	K	A	Q	R	Q	A	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions