Job Description C6Y4C0 Confidence 99.77% Date Sun Jul 8 11:45:08 BST 2012 Rank 81 Aligned Residues 84 % Identity 27% Template c2dgtA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein 30; PDBTitle: solution structure of the second rna binding domain in rna-2 binding protein 30 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		G	S	S	G	K	A	S	T	K	L	H	V	G	N	I	S	P	T	C	T	N	Q	E	L	R	A	K	F	E	E	Y	G	P	V	I	E	C	D	.	.	.	.	.	.	.	I	V	K	D	Y	A	F	V	H	M	E	R	A	E	D	A	V	E	A	I	R	G	L	D	N	T	E	F	Q	G	K	R	M	H	V
Template Known Secondary structure		S					S	S							S			S	S												T	T	S							.	.	.	.	.	.	.			S	S							S													T	T				T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		91	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	A	K	S	R	E	R	Y	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	S	T	S	R	L	R	T	A	S
Template Known Secondary structure				S	S				S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions