Job Description C6Y4C0 Confidence 99.77% Date Sun Jul 8 11:45:08 BST 2012 Rank 76 Aligned Residues 93 % Identity 15% Template c2dgsA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:daz-associated protein 1; PDBTitle: solution structure of the second rna binding domain in daz-2 associated protein 1 Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I
Query Conservation																																															.
Alig confidence																																															.																								.
Template Conservation																																																																							.
Template Sequence		S	S	G	S	S	G	S	K	S	N	K	I	F	V	G	G	I	P	H	N	C	G	E	T	E	L	R	E	Y	F	K	K	F	G	V	V	T	E	V	V	M	I	Y	D	A	E	K	Q	R	P	R	G	F	G	F	I	T	F	E	D	E	Q	S	V	D	Q	A	V	N	.	M	H	F	H	D	I	M	G	K	K
Template Known Secondary structure								S	S								S			S	S											S	S	S	S											T	T	T		S			S							S	S										.					B	S	S	S		B
Template Predicted Secondary structure																																																																							.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	V	E	W	A	K	S	R	E	R	Y	H	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	V	K	R	A	E	P	R	D	S	K	S	S	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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