Job Description C6Y4C0 Confidence 99.76% Date Sun Jul 8 11:45:08 BST 2012 Rank 84 Aligned Residues 98 % Identity 18% Template c2d9pA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:polyadenylate-binding protein 3; PDBTitle: solution structure of rna binding domain 4 in2 polyadenylation binding protein 3 Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	P	S	N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		G	S	S	G	S	S	G	D	R	I	T	R	Y	Q	V	V	N	L	Y	V	K	N	L	D	D	G	I	D	D	E	R	L	R	K	A	F	S	P	F	G	T	I	T	S	A	K	V	M	M	E	.	G	G	R	S	K	G	F	G	F	V	C	F	S	S	P	E	E	A	T	K	A	V	T	E	M	N	G	R	I
Template Known Secondary structure														S	S											T	T									T	T	T	T	T	S											.	S	S	S										S	S												T	T		B
Template Predicted Secondary structure																																																				.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	N	D	I	I	F	V	E	W	A	K	S	R	E	R	Y	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	T	K	P	L	Y	V	A	L	A	Q	R	K	E	E	R	Q	S
Template Known Secondary structure		S	S	S	S	B							S	S
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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