Job Description C6Y4C0 Confidence 99.70% Date Sun Jul 8 11:45:08 BST 2012 Rank 171 Aligned Residues 93 % Identity 19% Template c2adcA_ PDB info PDB header:rna binding protein/rna Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1; PDBTitle: solution structure of polypyrimidine tract binding protein2 rbd34 complexed with cucucu rna Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	N	A	P	S	N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N
Query Conservation
Alig confidence																																																						.	.	.
Template Conservation																																																						.	.	.
Template Sequence		R	F	K	K	P	G	S	K	N	F	Q	N	I	F	P	P	S	A	T	L	H	L	S	N	I	P	P	S	V	S	E	E	D	L	K	V	L	F	S	S	N	G	G	V	V	K	G	F	K	F	F	Q	.	.	.	K	D	R	K	M	A	L	I	Q	M	G	S	V	E	E	A	V	Q	A	L	I	D	L	H	N
Template Known Secondary structure					S	T	T	S	G	G	G	T	T				S		S									T	T												T	T	S										S	.	.	.	S	S	T	T							S	S												T	T
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.				.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		81	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	K	I	.	G	N	D	I	I	F	V	E	W	A	K	S	R
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		H	D	L	G	E	N	H	H	L	R	V	S	F	S	K	S	T
Template Known Secondary structure			B	S	S	S	S		B							S	S
Template Predicted Secondary structure
Template SS confidence
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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