Job Description C6Y4C0 Confidence 99.72% Date Sun Jul 8 11:45:08 BST 2012 Rank 146 Aligned Residues 94 % Identity 14% Template c2adbA_ PDB info PDB header:rna binding protein/rna Chain: A: PDB Molecule:polypyrimidine tract-binding protein 1; PDBTitle: solution structure of polypyrimidine tract binding protein2 rbd2 complexed with cucucu rna Resolution UNK

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	.	.	G	N	D	I	I	F	V	E	W
Query Conservation																																																																							.	.
Alig confidence																																							.	.	.																														.	.
Template Conservation																																							.	.	.
Template Sequence		S	P	V	L	R	I	I	V	E	N	L	F	Y	P	V	T	L	D	V	L	H	Q	I	F	S	K	F	G	T	V	L	K	I	I	T	F	T	.	.	.	K	N	N	Q	F	Q	A	L	L	Q	Y	A	D	P	V	S	A	Q	H	A	K	L	S	L	D	G	Q	N	I	Y	N	A	C	C	T	L	R	I	D	F
Template Known Secondary structure									S		S			S	T	T										T	T	T	S										.	.	.		T	T									S														S			S	S	T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	R	E	R	Y	H	R	D	D	K	R	R	L	S	N	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	L	T	S	L	N	V	K	Y	N	N	D	K	S	R	D	Y	T
Template Known Secondary structure			S	S		S						T	T	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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