Job Description C6Y4C0 Confidence 99.75% Date Sun Jul 8 11:45:08 BST 2012 Rank 102 Aligned Residues 87 % Identity 16% Template c2a3jA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:u1 small nuclear ribonucleoprotein a; PDBTitle: structure of urndesign, a complete computational redesign2 of human u1a protein Resolution UNK

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	.	.	.	.	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.																	.	.
Template Conservation																																															.	.
Template Sequence		T	P	P	H	T	E	P	S	Q	V	V	L	I	T	N	I	N	P	E	V	P	K	E	K	L	Q	A	L	L	Y	A	L	A	S	S	Q	G	D	I	L	D	I	V	V	D	.	.	L	S	D	D	N	S	G	K	A	Y	I	V	F	A	T	Q	E	S	A	Q	A	F	V	E	A	F	Q	G	Y	P	F	Q	G
Template Known Secondary structure							S			S						S			T	T	S																	S									.	.				S	S									S	S											S	T	T				T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	F	V	E	W	A	K	S	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	L	V	I	T	F	S	E	T	P	Q	S
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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