Job Description C6Y4C0 Confidence 99.45% Date Sun Jul 8 11:45:08 BST 2012 Rank 214 Aligned Residues 74 % Identity 16% Template c1wwhB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:nucleoporin 35; PDBTitle: crystal structure of the mppn domain of mouse nup35 Resolution 2.70 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	.	I	I	F	V	E	W	A	K	S
Query Conservation																																																																								.
Alig confidence																.																				.	.	.	.	.																					.											.
Template Conservation																.																				.	.	.	.	.																					.
Template Sequence		D	T	W	V	T	V	F	G	F	P	Q	A	S	A	.	S	Y	I	L	L	Q	F	A	Q	Y	G	N	I	L	K	H	V	M	S	.	.	.	.	.	N	T	G	N	W	M	H	I	R	Y	Q	S	K	L	Q	A	R	K	A	L	.	S	K	D	G	R	I	F	G	E	S	I	M	I	G	V	K	P	C	I	D
Template Known Secondary structure		T	T									G	G	G		.									T	T	S			S						.	.	.	.	.	S	S		S							S	S									.	T	T	T	T				T	T	T
Template Predicted Secondary structure																.																				.	.	.	.	.																					.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		96	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		245	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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