Job Description C6Y4C0 Confidence 99.62% Date Sun Jul 8 11:45:08 BST 2012 Rank 194 Aligned Residues 91 % Identity 16% Template c1qm9A_ PDB info PDB header:ribonucleoprotein Chain: A: PDB Molecule:polypyrimidine tract-binding protein; PDBTitle: nmr, representative structure Resolution UNK

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		17	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		G	H	T	L	Y	I	R	N	F	.	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K	S
Query Conservation											.
Alig confidence											.																													.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		N	S	V	L	L	V	S	N	L	N	P	E	R	V	T	P	Q	S	L	F	I	L	F	G	V	Y	G	D	V	Q	R	V	K	I	L	F	N	K	.	.	.	.	K	E	N	A	L	V	Q	M	A	D	G	N	Q	A	Q	L	A	M	S	H	L	N	G	H	K	L	H	G	K	P	I	R	I	T	L	S	K	H
Template Known Secondary structure												S	S	S												T	T				S					S	T	T		.	.	.	.	S	S							T	T	T											T	T				S	S
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	R	Y	H	R	D	D	K	R	R	L	S	N	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	V	Q	L	P	R	E	G	Q	E	D	Q	G	L	T
Template Known Secondary structure			S				S	S	S	S	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions