Job Description C6Y4C0 Confidence 99.66% Date Sun Jul 8 11:45:08 BST 2012 Rank 186 Aligned Residues 80 % Identity 21% Template c1cvjF_ PDB info PDB header:gene regulation/rna Chain: F: PDB Molecule:polyadenylate binding protein 1; PDBTitle: x-ray crystal structure of the poly(a)-binding protein in2 complex with polyadenylate rna Resolution 2.60 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K	S	R
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		A	S	L	Y	V	G	D	L	H	P	D	V	T	E	A	M	L	Y	E	K	F	S	P	A	G	P	I	L	S	I	R	V	C	R	D	M	I	T	R	R	S	L	G	Y	A	Y	V	N	F	Q	Q	P	A	D	A	E	R	A	L	D	T	M	N	F	D	V	I	K	G	K	P	V	R	I	M	W	S	Q	R	D
Template Known Secondary structure											T	T											G	G	G	S											T	T	T												S	S									T	T	S	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		97
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		91

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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