Job Description O74749 Confidence 100.00% Date Sun Jul 8 11:51:36 BST 2012 Rank 3 Aligned Residues 168 % Identity 19% Template c3zyqA_ PDB info PDB header:signaling Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine kinase PDBTitle: crystal structure of the tandem vhs and fyve domains of hepatocyte2 growth factor-regulated tyrosine kinase substrate (hgs-hrs) at 1.483 a resolution Resolution 1.48 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	E	T	L	I	L	Q	A	T	D	E	K	N	T	K	E	K	W	D	V	I	M	D	A	C	D	Q	L	S	S	T	S	G	D	V	G	R	N	S	I	K	F	L	N	K	R	L	D	T	A	N	A	N	I	Q	L	L	A	L	T	L	T	D	A	I	V	K	N	C	K	T	S	I	V	R	E	I	S	S
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		T	F	E	R	L	L	D	K	A	T	S	Q	L	L	L	E	T	D	W	E	S	I	L	Q	I	C	D	L	I	R	Q	G	D	.	T	Q	A	K	Y	A	V	N	S	I	K	K	K	V	N	D	K	N	P	H	V	A	L	Y	A	L	E	V	M	E	S	V	V	K	N	C	G	Q	T	V	H	D	E	V	A	N
Template Known Secondary structure											T		T	T		S	S															T	T	S	.	S														T		S	S																											S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	F	T	D	S	L	L	K	I	A	S	D	S	T	T	H	N	R	V	R	S	R	I	A	V	L	V	N	E	W	A	E	I	M	K	K	D	P	N	M	S	L	M	Q	D	I	C	E	K	I	R	K	L	D	I	V	D	L	R	A	P	K	K	P	E	K	E	A	M	N	E	L	E	L	K	R	E	E	E
Query Conservation
Alig confidence													.																																																						.	.	.
Template Conservation													.																																																						.	.	.
Template Sequence		K	Q	T	M	E	E	L	K	D	L	L	.	K	R	Q	V	E	V	N	V	R	N	K	I	L	Y	L	I	Q	A	W	A	H	A	F	R	N	E	P	K	Y	K	V	V	Q	D	T	Y	Q	I	M	K	V	E	G	H	V	F	P	E	F	K	E	S	D	.	.	.	A	M	F	A	A	E	R	A	P	D	W	V
Template Known Secondary structure													.																							T	T	T		G	G	G														T								G	G	G	.	.	.	G
Template Predicted Secondary structure													.																																																						.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.
		168	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	Q	Y	A	L	A	L	S	L	S	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	E	E	C	H	R	C	R	V	Q	F	G
Template Known Secondary structure				S	B		T	T	T			B		B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions