Job Description O74749 Confidence 25.98% Date Sun Jul 8 11:51:36 BST 2012 Rank 315 Aligned Residues 98 % Identity 20% Template c3tjzB_ PDB info PDB header:protein transport/protein binding Chain: B: PDB Molecule:coatomer subunit gamma; PDBTitle: crystal structure of arf1 bound to the gamma/zeta-cop core complex Resolution 2.90 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	E	T	L	I	L	Q	A	T	D	E	K	N	T	K	E	K	W	D	V	I	M	D	A	C	D	Q	L	S	S	T	S	G	D	V	G	R	N	S	I	K	F	L	N	K	R	L	D	T	A	N	A	N	I	Q	L	L	A	L	T	L	T	D	A	I	V	K	N	C	K	T	S	I	V	R	E	I	S	S
Query Conservation
Alig confidence																																			.																																														.
Template Conservation																																			.																																														.
Template Sequence		A	I	E	R	Y	M	K	Q	A	I	V	D	K	V	P	S	V	S	S	S	A	L	V	S	S	L	H	L	L	K	C	S	F	.	D	V	V	K	R	W	V	N	E	A	Q	E	A	A	S	S	D	N	I	M	V	Q	Y	H	A	L	G	L	L	Y	H	V	R	K	N	D	R	L	A	V	S	K	M	I	S	.
Template Known Secondary structure												T		S	S															T	T	T			.					T	T								T	T		S	S																T	T											.
Template Predicted Secondary structure																																			.																																														.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	F	T	D	S	L	L	K	I	A	S	D	S	T	T	H	N	R	V	R	S	R	I	A	V	L	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	K	F	T	R	H	G	L	K	S	P	F	A	Y	C	M	M	I	R	V	A
Template Known Secondary structure		.	.	.	.	.	.	.	.				S	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions