Job Description O74749 Confidence 100.00% Date Sun Jul 8 11:51:36 BST 2012 Rank 9 Aligned Residues 135 % Identity 24% Template c3rruA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:tom1l1 protein; PDBTitle: x-ray crystal structure of the vhs domain of human tom1-like protein,2 northeast structural genomics consortium target hr3050e Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		P	N	S	I	E	T	L	I	L	Q	A	T	D	E	K	N	T	K	E	K	W	D	V	I	M	D	A	C	D	Q	L	S	S	T	S	G	D	V	G	R	N	S	I	K	F	L	N	K	R	L	D	T	A	.	N	A	N	I	Q	L	L	A	L	T	L	T	D	A	I	V	K	N	C	K	T	S	I	V	R	E
Query Conservation																																																							.
Alig confidence																																					.																		.
Template Conservation																																					.
Template Sequence		A	T	S	V	G	H	L	I	E	K	A	T	F	A	G	V	Q	T	E	D	W	G	Q	F	X	H	I	C	D	I	I	N	T	T	Q	.	D	G	P	K	D	A	V	K	A	L	K	K	R	I	S	K	N	Y	N	H	K	E	I	Q	L	T	L	S	L	I	D	X	C	V	Q	N	C	G	P	S	F	Q	S	L
Template Known Secondary structure		G	S										T		S	S			S																S	T	.	T														T	T																					S
Template Predicted Secondary structure																																					.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		85	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure											.									.
Query SS confidence											.									.
Query Sequence		I	S	S	R	T	F	T	D	S	.	L	L	K	I	A	S	D	S	.	T	T	H	N	R	V	R	S	R	I	A	V	L	V	N	E	W	A	E	I	M	K	K	D	P	N	M	S	L	M	Q	D	I	C	E	K	I	R	K	L
Query Conservation											.									.
Alig confidence											.									.
Template Conservation
Template Sequence		I	V	K	K	E	F	V	K	E	N	L	V	K	L	L	N	P	R	Y	N	L	P	L	D	I	Q	N	R	I	L	N	F	I	K	T	W	S	Q	G	F	P	G	G	V	D	V	S	E	V	K	E	V	Y	L	D	L	V	K	K
Template Known Secondary structure			S	S					T	T	T	T	G	G	G	G	S	G	G	G																			T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions