Job Description O74749 Confidence 40.96% Date Sun Jul 8 11:51:36 BST 2012 Rank 299 Aligned Residues 102 % Identity 10% Template c3icxB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:pre mrna splicing protein; PDBTitle: crystal structure of sulfolobus solfataricus nop5 (135-380) Resolution 3.10 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																								.	.	.	.	.	.	.	.	50	.	.						.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.				.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.				.
Query Sequence		N	T	K	E	K	W	D	V	I	M	D	A	C	D	Q	L	S	S	T	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	G	R	N	S	I	K	F	L	N	.	.	.	.	.	K	R	L	.	D	T	A	N	A	N	I	Q	L	L	A	L	T	L	T	D
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.				.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.				.
Template Conservation
Template Sequence		I	S	E	D	D	L	S	A	M	R	M	I	A	N	T	I	L	D	L	Y	N	I	R	R	N	L	N	N	Y	L	E	G	V	M	K	E	V	A	P	N	V	T	A	L	V	G	P	A	L	G	A	R	L	L	S	I	A	G	S	L	D	E	L	A	K	M	P	A	S	T	I	Q	V	L	G	I	I	F	Q	Y
Template Known Secondary structure																																							S																				S	S					T	T	S						T	T			G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		A	I	V	K	N	C	K	T	S	I	V	R	E	I	.	.	.	.	S	S	R	T	F	T	D	S	L	L	K	I	A	S	D	S	T	T	H	N	R	V	R	S	R	I	A	V	L	V	N	E	W	A	E	I	M
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.
Template Conservation
Template Sequence		P	A	I	H	T	S	P	R	W	Q	R	G	K	I	A	R	A	L	A	A	K	L	A	I	A	A	R	V	D	A	F	S	G	R	F	I	G	D	Q	L	N	E	Q	L	K	K	R	I	D	E	I	K	E	K	F
Template Known Secondary structure						T	S																									T	T																					T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions