Job Description O74749 Confidence 34.65% Date Sun Jul 8 11:51:36 BST 2012 Rank 310 Aligned Residues 132 % Identity 13% Template c3ibvB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:exportin-t; PDBTitle: karyopherin cytosolic state Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		I	E	T	L	I	L	Q	A	T	D	E	K	N	T	K	E	K	W	D	V	I	M	D	A	C	D	Q	L	S	S	T	S	G	D	V	G	R	N	S	I	K	F	L	N	K	R	L	D	T	A	N	A	N	I	Q	L	L	A	L	T	L	T	D	A	I	V	K	N	.	.	C	K	T	S	I	V	R	E	I	S
Query Conservation																																																																						.	.
Alig confidence																																		.														.																						.	.
Template Conservation																																		.														.
Template Sequence		V	E	N	A	V	E	A	A	L	D	P	S	V	G	P	I	I	K	Q	Q	A	T	D	F	I	G	S	L	R	S	S	S	.	T	G	W	K	I	C	H	E	I	F	S	E	K	.	T	K	Y	K	P	S	T	R	L	I	C	L	Q	T	L	S	E	K	V	R	E	W	N	N	E	S	N	L	L	E	L	Q	M
Template Known Secondary structure												T	T	S		T	T															S	T	.	T									T	T			.	S	S	S																					T	T	T	S
Template Predicted Secondary structure																																		.														.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	T	F	T	D	S	L	L	K	I	A	S	D	S	T	T	H	N	R	V	R	S	R	I	A	V	L	V	N	E	W	A	E	I	M	K	K	D	P	N	M	S	L	M	Q	D	I	C	E	K	I	R	K	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	D	S	V	W	S	Y	I	K	E	L	S	F	L	D	E	P	A	Y	I	S	N	A	V	Q	H	L	L	T	L	L	F	L	Q	L	Y	P	S	N	W	N	D	F	F	A	S	L	Q	G	V	I	A	A	S	S
Template Known Secondary structure												S	T	T	S	T	T	S																				T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions