Return to main results Retrieve Phyre Job Id

Job DescriptionO74749
Confidence99.39%DateSun Jul 8 11:51:36 BST 2012
Rank20Aligned Residues146
% Identity21%Templatec3a98A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:dedicator of cytokinesis protein 2; PDBTitle: crystal structure of the complex of the interacting regions of dock22 and elmo1
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   207..210.........220.........230.........240.........250......... 260.........270.........280...
Predicted Secondary structure 






































...














Query SS confidence 




















































. . .























Query Sequence  SNLATSPASTVSRVRALYDFAATEQGELSFKKGDIILVLESVYKDWWKGSCKN. . . AVGIFPVNYVQRVVEPTIEQQRQS
Query Conservation                 

         

    



 
       
  
   
...  
  
 


              
Alig confidence 








































.










...


















.....
Template Conservation     

 
       

 
 
      

 
  

 
 
   .   

 
         



 


      
  .....
Template Sequence  GXAPWRKADKERHGVAIYNFQGSGAPQLSLQIGDVVRIQET. CGDWYRGYLIKHKXLQGIFPKSFIHIKEVIPAE. . . . .
Template Known Secondary structure 





SS

SS
B

SSTTB

B
TT
.TTTTGGG



T.....
Template Predicted Secondary structure 
























.
















.....
Template SS confidence 















































































   0.........10.........20.........30.........40 .........50.........60.........70...
 
   284.....290.........300.........310.........320.........330.........340.........350.........360...
Predicted Secondary structure 










Query SS confidence 















































































Query Sequence  AHMEQQVFDALPQIDELLDTLSTTSPDAADDDALQGKYHAMIALRPKLVRLIEKYASQKEELMDLNERLLVARRDYEKLY
Query Conservation        
          
  
            
 

      


 
   
     
   
  

 

  
  

  

Alig confidence 
























.






















....


























Template Conservation     
 

   



    
 
    .       
      
   
 


....

 
  

   

 
    

 

  
Template Sequence  IPLAQEVTTTLWEWGSIWKQLYVAS. KKERFLQVQSXXYDLXEWRSQLL. . . . SGTLPKDELKELKQKVTSKIDYGNKIL
Template Known Secondary structure  TT.
....T
S
T
Template Predicted Secondary structure 

.

....





Template SS confidence 















































































   85....90.........100......... 110.........120.........130.. .......140.........150.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions