Job Description O74749 Confidence 89.83% Date Sun Jul 8 11:51:36 BST 2012 Rank 254 Aligned Residues 93 % Identity 12% Template c2w3cA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:general vesicular transport factor p115; PDBTitle: globular head region of the human general vesicular2 transport factor p115 Resolution 2.22 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		N	S	I	K	F	L	N	K	R	L	D	T	A	N	A	N	I	Q	L	L	A	L	T	L	T	D	A	I	V	K	N	C	K	T	S	I	V	R	E	I	S	S	R	.	T	F	T	D	S	L	L	K	I	A	S	D	S	T	T	H	N	R	V	R	S	R	I	A	V	L	V	N	E	W	A	E	I	M	K	K
Query Conservation																																													.
Alig confidence																																													.														.	.																	.	.	.
Template Conservation																																																											.	.																	.	.	.
Template Sequence		E	N	V	T	L	L	L	S	L	L	E	E	F	D	F	H	V	R	W	P	G	V	K	L	L	T	S	L	L	K	Q	L	G	P	Q	V	Q	Q	I	I	L	V	S	P	M	G	V	S	R	L	M	D	L	L	A	D	S	.	.	R	E	V	I	R	N	D	G	V	L	L	L	Q	A	L	T	.	.	.	R	S
Template Known Secondary structure											T	T																					S											S	T	T							G	G	G	G		S	.	.	S																.	.	.	T	T
Template Predicted Secondary structure																																																											.	.																	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.
		125	.	.	.	.	130	.	.	.								.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		D	P	N	M	S	L	M	Q	D	.	.	.	.	.	.	.	I	C	E	K	I	R	K	L	D	I
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	A	I	Q	K	I	V	A	F	E	N	A	F	E	R	L	L	D	I	I	S	E	E	G	N
Template Known Secondary structure												T	T												T	T	G
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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