Job Description O74749 Confidence 99.56% Date Sun Jul 8 11:51:36 BST 2012 Rank 13 Aligned Residues 80 % Identity 18% Template c2pjwV_ PDB info PDB header:endocytosis/exocytosis Chain: V: PDB Molecule:vacuolar protein sorting-associated protein 27; PDBTitle: the vps27/hse1 complex is a gat domain-based scaffold for2 ubiquitin-dependent sorting Resolution 3.01 Å

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		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		F	D	A	L	P	Q	I	D	E	L	L	D	T	L	S	T	T	S	P	.	D	A	A	D	D	D	A	L	Q	G	K	Y	H	A	M	I	A	L	R	P	K	L	V	R	L	I	E	K	Y	A	S	Q	K	E	E	L	M	D	L	N	E	R	L	L	V	A	R	R	D	Y	E	K	L	Y	E	Q	S	M	S	E
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		K	D	S	I	Y	X	F	A	S	L	V	E	K	X	K	S	R	P	L	N	E	I	L	E	D	S	K	L	Q	N	L	A	Q	R	V	F	A	S	K	A	R	L	N	Y	A	L	N	D	K	A	Q	K	Y	N	T	L	I	E	X	N	G	K	I	S	E	I	X	N	I	Y	D	R	L	L	E	Q	Q	L	Q	S
Template Known Secondary structure																	T		S		S	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		370
Predicted Secondary structure
Query SS confidence
Query Sequence		M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		435

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions