Job Description O74749 Confidence 99.41% Date Sun Jul 8 11:51:36 BST 2012 Rank 18 Aligned Residues 81 % Identity 31% Template c2pjwH_ PDB info PDB header:endocytosis/exocytosis Chain: H: PDB Molecule:uncharacterized protein yhl002w; PDBTitle: the vps27/hse1 complex is a gat domain-based scaffold for2 ubiquitin-dependent sorting Resolution 3.01 Å

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		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310						.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		M	E	Q	Q	V	F	D	A	L	P	Q	I	D	E	L	L	D	T	L	S	T	T	S	P	D	.	.	.	.	.	A	A	D	D	D	A	L	Q	G	K	Y	H	A	M	I	A	L	R	P	K	L	V	R	L	I	E	K	Y	A	S	Q	K	E	E	L	M	D	L	N	E	R	L	L	V	A	R	R	D	Y	E
Query Conservation																											.	.	.	.	.
Alig confidence																											.	.	.	.	.
Template Conservation
Template Sequence		K	E	A	I	V	F	S	Q	K	T	T	I	D	Q	L	H	N	S	L	N	A	A	S	K	T	G	N	S	N	E	V	L	Q	D	P	H	I	G	D	X	Y	G	S	V	T	P	L	R	P	Q	V	T	R	X	L	G	K	Y	A	K	E	K	E	D	X	L	S	L	R	Q	V	L	A	N	A	E	R	S	Y	N
Template Known Secondary structure									T																T	T			T					S												T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		361	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	Y	E	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	X	D	R	A
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions