Job Description O74749 Confidence 31.06% Date Sun Jul 8 11:51:36 BST 2012 Rank 311 Aligned Residues 97 % Identity 10% Template c2ot8B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:transportin-1; PDBTitle: karyopherin beta2/transportin-hnrnpm nls complex Resolution 3.10 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	V	I	M	D	A	C	D	Q	L	S	S	T	S	G	D	V	G	R	N	S	I	K	F	L	N	K	R	L	D	T	A	N	A	N	I	Q	L	L	A	L	T	L	T	D	A	I	V	K	N	C	K	T	S	I	V	R	E	I	S	S	R	T	F	T	D	S	L	L	K	I	A	S	D	S	T	T	H	N
Query Conservation
Alig confidence																																																																.	.
Template Conservation																																																																.	.
Template Sequence		F	A	L	L	G	D	L	T	K	A	C	F	Q	H	V	K	P	C	I	A	D	F	M	P	I	L	G	T	N	L	N	P	E	F	I	S	V	C	N	N	A	T	W	A	I	G	E	I	S	I	Q	M	G	I	E	M	Q	P	Y	I	P	M	.	.	V	L	H	Q	L	V	E	I	I	N	R	P	N	T	P	K
Template Known Secondary structure																	G	G	G											T			T	T	S																			G	G	G	G	G	G	G				.	.												T	T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		688	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.			750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	R	S	R	I	A	V	L	V	N	E	W	A	E	I	M	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	L	E	N	T	A	I	T	I	G	R	L	G	Y	V	C	P	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		766	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions