Job Description O74749 Confidence 81.41% Date Sun Jul 8 11:51:36 BST 2012 Rank 262 Aligned Residues 70 % Identity 11% Template c2jdqB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:importin alpha-1 subunit; PDBTitle: c-terminal domain of influenza a virus polymerase pb22 subunit in complex with human importin alpha5 Resolution 2.2 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		K	F	L	N	K	R	L	D	T	A	N	A	N	I	Q	L	L	A	L	T	L	T	D	A	I	V	K	N	.	C	K	T	S	I	V	R	E	I	S	S	R	T	F	T	D	S	L	L	K	I	A	S	D	S	T	T	H	N	R	V	R	S	R	I	A	V	L	V	N	E	W	A
Query Conservation																														.
Alig confidence																														.																								.
Template Conservation																																																						.
Template Sequence		S	D	M	I	E	M	I	F	S	K	S	P	E	Q	Q	L	S	A	T	Q	K	F	R	K	L	L	S	K	E	P	N	P	P	I	D	E	V	I	S	T	P	G	V	V	A	R	F	V	E	F	L	K	.	R	K	E	N	C	T	L	Q	F	E	S	A	W	V	L	T	N	I	A
Template Known Secondary structure									S	S	S																T	T	S	S	S									T	S	T	T									T	T	.		T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions