Job Description O74749 Confidence 54.14% Date Sun Jul 8 11:51:36 BST 2012 Rank 287 Aligned Residues 90 % Identity 16% Template c1w63A_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:adapter-related protein complex 1 gamma 1 PDBTitle: ap1 clathrin adaptor core Resolution 4.0 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	S	I	K	F	L	N	K	R	L	D	T	A	N	A	N	I	Q	L	L	A	L	T	L	T	D	A	I	V	K	N	C	K	T	S	I	V	R	E	I	S	S	R	T	F	T	D	S	L	L	K	I	A	S	D	S	T	T	H	N	R	V	R	S	R	I	A	V	L	V	N	E	W	A	E	I	M	K	K
Query Conservation
Alig confidence																																							.	.	.	.	.	.															.	.																	.	.	.
Template Conservation																																							.	.	.	.	.	.															.	.																	.	.	.
Template Sequence		V	L	A	I	N	I	L	G	R	F	L	L	N	N	D	K	N	I	R	Y	V	A	L	T	S	L	L	K	T	V	Q	T	D	H	N	A	V	.	.	.	.	.	.	Q	R	H	R	S	T	I	V	D	C	L	K	D	L	.	.	D	V	S	I	K	R	R	A	M	E	L	S	F	A	L	V	.	.	.	N	G
Template Known Secondary structure													T		S	S	T	T	T																				.	.	.	.	.	.	G	G	G							G	G	G	S	S	.	.																	.	.	.		S
Template Predicted Secondary structure																																							.	.	.	.	.	.															.	.																	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.							.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	N	M	S	L	M	Q	D	I	C	E	K	I	R	K	L	D	I	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	I	R	G	M	M	K	E	L	L	Y	F	L	D	S	C	E	P	E	F
Template Known Secondary structure		S	S	T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions