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Job DescriptionQ9Y7Z8
Confidence100.00%DateSun Jul 8 12:04:58 BST 2012
Rank14Aligned Residues681
% Identity39%Templated1w7ja2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Motor proteins
Resolution2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.... .....70.........80.........90.........100.........110...
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Query Sequence  TRKKTVGVDDLTLLSKITDEEINKNLELRF. RNGEIYTYIGHVLISVNPFRDLGIYTMDILKSYQGKNRLETSPHVYAIA
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Template Sequence  NPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVA
Template Known Secondary structure 

GGGTT
SSSTT
S

S


TT

SS

S

STT

GGGS


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   64.....70.........80.........90.........100.........110.........120.........130.........140...
 
   114.....120.........130.........140.........150.........160.........170.........180.........190...
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Query Sequence  ENAYYQMKSYHENQCIIISGESGAGKTEAAKRIMQYITHVSKSVGTEIERVSEIILATNPLLESFGCAKTLRNNNSSRHG
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Template Sequence  EEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEA. . NVEEKVLASNPIMESIGNAKTTRNDNSSRFG
Template Known Secondary structure  T


STTSST

SSSS..


SS
TT
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   144.....150.........160.........170.........180.........190 .........200.........210.........220.
 
   194.....200.........210.........220.........230.........240.........250.........260.........270...
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Query Sequence  KYLEMIFNSGGVPVGAKITNYLLEKNRIVNQVRNERNFHIFYQFTKSAPQKYRDTYGIQGPENYVYTSACQCLSVDGISD
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Template Sequence  KYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDD
Template Known Secondary structure 
TTS



GGGGT


TT

SBTTTSGGGGGG



TTTSTTS



TT

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   222.......230.........240.........250.........260.........270.........280.........290.........300.
 
   274.....280.........290.........300.........310.... .....320.........330.........340.........350..
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Query Sequence  EKDFQGTMNAMKVIGITEPEQDEIFRMLSIILWLGNIQFQE. GQDGGSVISDKSITEFLGYLIGVPVAAIERALTIRIMQ
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Template Sequence  AKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLA
Template Known Secondary structure  TT

T


TT

TT
T

S
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   302.......310.........320.........330.........340.........350.........360.........370.........380.
 
   353......360.........370.........380.........390.........400.........410.........420.........430..
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Query Sequence  TQHGARRGSVYEVPLNPTQALAVRDALSMAIYNCLFDWIVERVNKALVTSDNSVSNSIGILDIYGFEIFENNSFEQLCIN
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Template Sequence  T. . . . . ATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHS. FIGVLDIYGFETFEINSFEQFCIN
Template Known Secondary structure 
.....SS




SS

S.






SS

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   382 .......390.........400.........410.........420.........430. ........440.........450.....
 
   433......440.........450.........460.........470.........480.........490.........500.........510..
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Query Sequence  YVNEKLQQIFIELTLKTEQEEYVREQIAWTPIKYFNNKVVCDLIESKRPPGLFAAMNDAIATAHADSAAADSAFAQRLNF
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Template Sequence  YANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK. . MGVLDLLDEECKMPK. . . . GSDDTWAQKLYN
Template Known Secondary structure  TT

GGG





ST..TSTSTT....

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   456...460.........470.........480.........490.........500.. .......510....... ..520.........
 
   513...... 520.........530.........540.........550.........560... ......570.........580......
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Query Sequence  LSSNPHF. . . . . EQRQNQFIVKHYAGDVTYSITGMTDKNKDQLATDILNLIHSSNN. EFMKSIFPVAEESNSRRRPPTAG
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Template Sequence  THLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELF. . . . . . . . . . . QKTVG
Template Known Secondary structure  TTT
TT

TT
SS
SS

TT



T
SS
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   530.........540.........550.........560.........570.........580.........590... .....
 
   587..590.........600.........610.........620.........630.........640.........650.........660......
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Query Sequence  DRIKTSANDLVETLMKCQPSYIRTIKPNQTKSPNDYDQQMVLHQIKYLGLQENIRIRRAGFAYRQAFDTFAQRFAVLSGK
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Template Sequence  HQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQ
Template Known Secondary structure  TS


TT

TT


TTS

GGGS
G
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   638.640.........650.........660.........670.........680.........690.........700.........710.......
 
   667..670.........680.........690.........700.........710.........720.........730.........740......
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Query Sequence  TSYAGEYTWQGDDKSACEQILKDTNIPSSEYQMGTSKVFIKNPETLFALEDMRDKFWDTMATRIQRAWRSYVRRRSEAAA
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Template Sequence  . . . . . . KDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRA. GQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRM
Template Known Secondary structure  ......GG

S



GGG
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T.T
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   718.720.........730.........740.........750... ......760.........770.........780.........790
 
   747
Predicted Secondary structure 
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Query Sequence  C
Query Conservation   
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Template Conservation 
Template Sequence  R
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   791
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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