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Job DescriptionQ9Y7Z8
Confidence100.00%DateSun Jul 8 12:04:58 BST 2012
Rank18Aligned Residues638
% Identity47%Templated1lkxa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Motor proteins
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110.........120
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Query Sequence  GVDDLTLLSKITDEEINKNLELRFRNGEIYTYIGHVLISVNPFRDLGIYTMDILKSYQGKNRLETSPHVYAIAENAYYQM
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Template Sequence  GVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNLNIYKESDIKAYNGRYKYEMPPHMYALANDAYRSM
Template Known Secondary structure 

SSGGG
SS
STT

SSS


SS

S

SSS

GGGS


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   910.........20.........30.........40.........50.........60.........70.........80........
 
   121........130.........140.........150.........160.........170.........180.........190.........200
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Query Sequence  KSYHENQCIIISGESGAGKTEAAKRIMQYITHVSKSVGTEIERVSEIILATNPLLESFGCAKTLRNNNSSRHGKYLEMIF
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Template Sequence  RQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQF
Template Known Secondary structure 



STTSSS
SS
BB

SS
SS
B
S
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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   201........210.........220.........230.........240.........250. ........260.........270.........
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Query Sequence  NSGGVPVGAKITNYLLEKNRIVNQVRNERNFHIFYQFTKSAPQKYRDTYGI. QGPENYVYTSACQCLSVDGISDEKDFQG
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Template Sequence  NAVGSPIGGKITNYLLEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFKI
Template Known Secondary structure 
TT




GGGGT


TT


BTTS
T

S
GGGSTT



TT

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   169170.........180.........190.........200.........210.........220.........230.........240........
 
   280.........290.........300.........310.... .....320.........330.........340.........350........
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Query Sequence  TMNAMKVIGITEPEQDEIFRMLSIILWLGNIQFQE. GQDGGSVISDKSITEFLGYLIGVPVAAIERALTIRIMQTQHGAR
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Template Sequence  IVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQTTVKVSDTKSLAAAASCLKTDQQSLSIALCYRSV. . . . . . .
Template Known Secondary structure  TT

TT

TT

SSTS
B


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   249250.........260.........270.........280.........290.........300.........310.........320.
 
   359360.........370.........380.........390.........400.........410.........420.........430........
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Query Sequence  RGSVYEVPLNPTQALAVRDALSMAIYNCLFDWIVERVNKALVTSDNSVSNSIGILDIYGFEIFENNSFEQLCINYVNEKL
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Template Sequence  . . . . ISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEKGP. VIGILDIYGFEVFQNNSFEQLNINFCNEKL
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B




S



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SSB
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   336...340.........350.........360.........370.........380 .........390.........400.........410
 
   439440.........450.........460.........470.........480.........490.........500.........510. ......
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Query Sequence  QQIFIELTLKTEQEEYVREQIAWTPIKYFNNKVVCDLIESKRPPGLFAAMNDAIATAHADSAAADSAFAQRLN. FLSSNP
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Template Sequence  QQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKK. PIGLISLLDEACLIAK. . . . STDQTFLDSICKQFEKNP
Template Known Secondary structure  TTT







S


TTSS.SSSSTT....

SSSST
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   411........420.........430.........440.........450. ........460....... ..470.........480.....
 
   518.520. ........530.........540.........550.........560.........570.........580........
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Query Sequence  HFEQ. . . . . . . . . RQNQFIVKHYAGDVTYSITGMTDKNKDQLATDILNLIHSSNNEFMKSIFPVAEESNSRRRPPTAGDR
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Template Sequence  HLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLF. . . . . . . . . . . PETAGSQ
Template Known Secondary structure  T
TTTS

TTS
TTTT
TT



T

S
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   486...490.........500.........510.........520.........530.........540....... ..550....
 
   589590.........600.........610.........620.........630.........640.........650.........660........
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Query Sequence  IKTSANDLVETLMKCQPSYIRTIKPNQTKSPNDYDQQMVLHQIKYLGLQENIRIRRAGFAYRQAFDTFAQRFAVLSGKTS
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Template Sequence  FRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKK. .
Template Known Secondary structure  TTS


TT

TT


TSS
SB

BSTTS
SSS

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   566...570.........580.........590.........600.........610.........620.........630.........640...
 
   669670.........680.........690.........700.........710.........
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Query Sequence  YAGEYTWQGDDKSACEQILKDTNIPSSEYQMGTSKVFIKNPETLFALEDMR
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Template Sequence  . . . . . . . . . . . KQATELILQQHNIDKEEIRMGKTKVFIRNPTTLFYFEEKR
Template Known Secondary structure  ...........
TT


GGG
SSBSSST

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   653......660.........670.........680.........690..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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