Return to main results Retrieve Phyre Job Id

Job DescriptionQ9Y7Z8
Confidence100.00%DateSun Jul 8 12:04:58 BST 2012
Rank12Aligned Residues692
% Identity35%Templated1kk8a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Motor proteins
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  TRKKTVGVDDLTLLSKITDEEINKNLELRFRNGEIYTYIGHVLISVNPFRDLGIYTMDILKSYQGKNRLETSPHVYAIAE
Query Conservation        
  

  
  
 
   
  
  
     


  
  

 


      
       
         

    
 
Alig confidence 















































































Template Conservation 

       

  
  


  

  
  

    


  
 








 
 

       
        







 
Template Sequence  NPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVAD
Template Known Secondary structure 

GGGTT
SBGGGSS

STT

TT

SS

STTSTT

GGGS


Template Predicted Secondary structure 




































Template SS confidence 















































































   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  NAYYQMKSYHENQCIIISGESGAGKTEAAKRIMQYITHVSKSVGTEIERVSEIILATNPLLESFGCAKTLRNNNSSRHGK
Query Conservation   

         
 











   
     
                 
   
 









  
 






Alig confidence 















































































Template Conservation   

  
      














  
 

 

   
         
   
   
 









  
 






Template Sequence  NAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGK
Template Known Secondary structure  TS
STTSSS










SS
TTSS
Template Predicted Secondary structure 































Template SS confidence 















































































   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   195....200.........210.........220.........230.........240.........250. ........260.........270...
Predicted Secondary structure 





















.

















Query SS confidence 
























































.





















Query Sequence  YLEMIFNSGGVPVGAKITNYLLEKNRIVNQVRNERNFHIFYQFTKSAPQKYRDTYGI. QGPENYVYTSACQCLSVDGISD
Query Conservation     
 
       
  
   






      







 
  
          
.        
            
Alig confidence 
























































.










.









Template Conservation     
 
   
 
 

 
  







     











 
        
 
      
 

  .         
Template Sequence  FIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQ. GCLTVDNIDD
Template Known Secondary structure 
TTSS


GGGGT


TT

SBTS
SSGGGT

S
GGG
TTT
S.S
S
BTTB
Template Predicted Secondary structure 

































.








Template SS confidence 















































































   246...250.........260.........270.........280.........290.........300.........310.... .....320....
 
   274.....280.........290.........300.........310.........320.........330.........340.........350...
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  EKDFQGTMNAMKVIGITEPEQDEIFRMLSIILWLGNIQFQEGQDGGSVISDKSITEFLGYLIGVPVAAIERALTIRIMQT
Query Conservation     
     
    
        
   




 



 
                   
 

      
   
       
Alig confidence 








































...

































..
Template Conservation     
  
  

  

    
   
  










 
  ...          
   
 



    
   
     ..
Template Sequence  VEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQ. . . EQAESDGTAEAEKVAFLCGINAGDLLKALLKPKV. .
Template Known Secondary structure  TT

TT


...


S
STS
S
..
Template Predicted Secondary structure 







...














..
Template SS confidence 















































































   325....330.........340.........350.........360..... ....370.........380.........390.........
 
   354.....360.........370.........380.........390.........400.........410.........420.........430...
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  QHGARRGSVYEVPLNPTQALAVRDALSMAIYNCLFDWIVERVNKALVTSDNSVSNSIGILDIYGFEIFENNSFEQLCINY
Query Conservation                    
   

 
 
 

  

  

  

  
          
 



 


    
  


 

 
Alig confidence  .......










































.




























Template Conservation  .......           
   

 


 

  

 


  

  
    .     





 


    









Template Sequence  . . . . . . . KMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKA. KRNYYIGVLDIAGFEIFDFNSFEQLCINY
Template Known Secondary structure  .......









.









SSB
Template Predicted Secondary structure  .......







.













Template SS confidence 















































































   404.....410.........420.........430.........440...... ...450.........460.........470.....
 
   434.....440.........450.........460....... ..470.........480.........490.........500.........510.
Predicted Secondary structure 










.













.
Query SS confidence 

































.











































.
Query Sequence  VNEKLQQIFIELTLKTEQEEYVREQIAWTPIKYF. NNKVVCDLIESKRPPGLFAAMNDAIATAHADSAAADSAFAQRLN.
Query Conservation   

 

          
   
  


        .

     
     
 
    


                     .
Alig confidence 

































.









..
















....










.
Template Conservation   




  
    
  
   
  


    
    

     

 ..
  


 




     .... 

  
  

  
Template Sequence  TNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIE. . KPMGILSILEEECMFPK. . . . ADDKSFQDKLYQ
Template Known Secondary structure  TT



S



..STTSTT
TT....

Template Predicted Secondary structure 













..







....

Template SS confidence 















































































   480.........490.........500.........510.........520.... .....530.........540. ........550...
 
   512....... 520.........530.........540.........550.........560.........570.........580.
Predicted Secondary structure 






..........

























Query SS confidence 







. . . . . . . . . .





























































Query Sequence  FLSSNPHF. . . . . . . . . . EQRQNQFIVKHYAGDVTYSITGMTDKNKDQLATDILNLIHSSNNEFMKSIFPVAEESNSRRR
Query Conservation          ..........      
 
 
 

 
 
       

 
            
       

           
Alig confidence 







..........


















































..........
Template Conservation                          
 
 



 
 
 
 





 
 
   
  

  
 
  
  

.......... 
Template Sequence  NHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELF. . . . . . . . . . K
Template Known Secondary structure  TTT
SS


S
SSTT



STT

SSS



T
SST..........
Template Predicted Secondary structure 




























..........
Template SS confidence 















































































   554.....560.........570.........580.........590.........600.........610.........620.. .
 
   582.......590.........600.........610.........620.........630.........640.........650.........660.
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  PPTAGDRIKTSANDLVETLMKCQPSYIRTIKPNQTKSPNDYDQQMVLHQIKYLGLQENIRIRRAGFAYRQAFDTFAQRFA
Query Conservation    
        
  
   
      







       

   
  

   
 

       
   
     
  

 
Alig confidence 
























































.....

















Template Conservation    

   
  

  

  
  
  








  
 
  

   
  


  



.....
 


 
    

  

 
Template Sequence  AQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLE. . . . . RKGFPSRLIYSEFKQRYS
Template Known Secondary structure 


TT


SS

TT


TTSSS

.....


S
G
Template Predicted Secondary structure 


















.....







Template SS confidence 















































































   624.....630.........640.........650.........660.........670.........680 .........690........
 
   662.......670.........680.........690.........700.........710.........720.........730.........740.
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  VLSGKTSYAGEYTWQGDDKSACEQILKDTNIPSSEYQMGTSKVFIKNPETLFALEDMRDKFWDTMATRIQRAWRSYVRRR
Query Conservation   
                       
            
 



 
       

  
       
  

   
    
 
Alig confidence 








.......






























.































Template Conservation   
       .......  
     

  
        








 .     

  
          

   
  
 

Template Sequence  ILAPNAIPQ. . . . . . . DGKTVSEKILAGLQMDPAEYRLGTTKVFFKA. GVLGNLEEMRDERLSKIISMFQAHIRGYLIRK
Template Known Secondary structure  GGSGGG


.......
T

GGG
SS
T.T
Template Predicted Secondary structure 






.......









.
Template SS confidence 















































































   722.......730 .........740.........750.........760. ........770.........780.........790...
 
   742. ......750.........760.........
Predicted Secondary structure  ........
Query SS confidence 

. . . . . . . .

























Query Sequence  SE. . . . . . . . AAACIQKLWNRNKVNMELERVRNEGT
Query Conservation    ........
   

   
    
      
    
Alig confidence 

........

























Template Conservation       
    
   

   
    

     

   
Template Sequence  AYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWKLYSK
Template Known Secondary structure  T
Template Predicted Secondary structure 


Template SS confidence 



































   797..800.........810.........820.........830..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions