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Job DescriptionQ9Y7Z8
Confidence100.00%DateSun Jul 8 12:04:58 BST 2012
Rank20Aligned Residues630
% Identity39%Templated1br2a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Motor proteins
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  RKKTVGVDDLTLLSKITDEEINKNLELRFRNGEIYTYIGHVLISVNPFRDLGIYTMDILKSYQGKNRLETSPHVYAIAEN
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Template Sequence  PPKFSKVEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADT
Template Known Secondary structure 
GGGTT
SBTTS
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STT


SSS

SS

TT

TTT

GGGS


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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   116...120.........130.........140.........150.........160.........170.........180.........190.....
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Query Sequence  AYYQMKSYHENQCIIISGESGAGKTEAAKRIMQYITHVSKSVGTEIERVSEIILATNPLLESFGCAKTLRNNNSSRHGKY
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Template Sequence  AYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASG. . . . . . ELEKQLLQANPILEAFGNAKTVKNDNSSRFGKF
Template Known Secondary structure  T


STTSS

......TT

SS
TTSS
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   160.........170.........180.........190.........200 .........210.........220.........230...
 
   196...200.........210.........220.........230.........240.........250.........260.........270.....
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Query Sequence  LEMIFNSGGVPVGAKITNYLLEKNRIVNQVRNERNFHIFYQFTKSAPQKYRDTYGIQGPENYVYTSACQCLSVDGISDEK
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Template Sequence  IRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSN. GHVPIPAQQDDE
Template Known Secondary structure 
TTS



GGGGT


TT


B

TTTT


TTT
TTSTT.S



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   252.......260.........270.........280.........290.........300.........310........ .320.........330
 
   276...280.........290.........300.........310.........320.........330.........340.........350.....
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Query Sequence  DFQGTMNAMKVIGITEPEQDEIFRMLSIILWLGNIQFQEGQDGGSVISDKSITEFLGYLIGVPVAAIERALTIRIMQTQH
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Template Sequence  MFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVF. . . KKEQASMPDNTAAQKVCHLMGINVTDFTRSILTP. . . . . .
Template Known Secondary structure  T




...B



B
S

T



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   331........340.........350.........360....... ..370.........380.........390.........400.
 
   356...360.........370.........380.........390.........400.........410.........420.........430.....
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Query Sequence  GARRGSVYEVPLNPTQALAVRDALSMAIYNCLFDWIVERVNKALVTSDNSVSNSIGILDIYGFEIFENNSFEQLCINYVN
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Template Sequence  . . . . . . . . . KAQTKEQADFAIEALAKAKFERLFRWILTRVNKAL. . . . . . DASFLGILDIAGFEIFEINSFEQLCINYTN
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SSB
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   416...420.........430.........440.........450 .........460.........470.........480
 
   436...440.........450.........460...... ...470......... 480.........490.........500.........510. .
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Query Sequence  EKLQQIFIELTLKTEQEEYVREQIAWTPIKY. FNNKVVCDLIESK. RPPGLFAAMNDAIATAHADSAAADSAFAQRLN. F
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Template Sequence  EKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEEC. . . . . . . . ATDTSFVEKLIQE
Template Known Secondary structure  TT













SSS


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   487..490.........500.........510.........520.........530.........540..... ....550........
 
   513......520.........530.........540.........550.........560.........570.........580.........590..
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Query Sequence  LSSNPHFEQRQNQFIVKHYAGDVTYSITGMTDKNKDQLATDILNLIHSSNNEFMKSIFPVAEESNSRRRPPTAGDRIKTS
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Template Sequence  QGNHAKFQKSKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLW. . . . . . . . . . . KRTVGQLYKEQ
Template Known Secondary structure  TTTSTT


TT
TT



T
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   563......570.........580.........590.........600.........610.........620 .........630.
 
   593......600.........610.........620.........630.........640.........650.........660.........670..
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Query Sequence  ANDLVETLMKCQPSYIRTIKPNQTKSPNDYDQQMVLHQIKYLGLQENIRIRRAGFAYRQAFDTFAQRFAVLSGKTSYAGE
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Template Sequence  LTKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAI. . . .
Template Known Secondary structure  TS


SS

TT


TTS

GGGGTTSS....
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   667..670.........680.........690.........700.........710.........720.........730.........740..
 
   673......680.........690.........700.........710.........720
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Query Sequence  YTWQGDDKSACEQILKDTNIPSSEYQMGTSKVFIKNPETLFALEDMRD
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Template Sequence  PKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRT. GVLAHLEEERD
Template Known Secondary structure 
SS


T

GGG
SS
T.T
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   743......750.........760.........770........ .780.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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