Job Description Q9Y7Z8 Confidence 100.00% Date Sun Jul 8 12:04:58 BST 2012 Rank 6 Aligned Residues 793 % Identity 32% Template c2ycuA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:non muscle myosin 2c, alpha-actinin; PDBTitle: crystal structure of human non muscle myosin 2c in pre-power stroke2 state Resolution 2.25 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	T	S	T	R	K	K	T	V	G	V	D	D	L	T	L	L	S	K	I	T	D	E	E	I	N	K	N	L	E	L	R	F	R	N	G	E	I	Y	T	Y	I	G	H	V	L	I	S	V	N	P	F	R	D	L	G	I	Y	T	M	D	I	L	K	S	Y	Q	G	K	N	R	L	E	T	S	P	H	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	R	M	N	P	P	K	F	S	K	A	E	D	M	A	E	L	T	C	L	N	E	A	S	V	L	H	N	L	R	E	R	Y	Y	S	G	L	I	Y	T	Y	S	G	L	F	C	V	V	I	N	P	Y	K	Q	L	P	I	Y	T	E	A	I	V	E	M	Y	R	G	K	K	R	H	E	V	P	P	H	V	Y
Template Known Secondary structure								G	G	G	T	T		S	B	G	G	G		S	S		S														T	T							T	T								S	S			S			S								T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		A	I	A	E	N	A	Y	Y	Q	M	K	S	Y	H	E	N	Q	C	I	I	I	S	G	E	S	G	A	G	K	T	E	A	A	K	R	I	M	Q	Y	I	T	H	V	S	K	S	V	G	T	E	I	E	R	.	.	.	.	V	S	E	I	I	L	A	T	N	P	L	L	E	S	F	G	C	A	K	T	L	R	N
Query Conservation																																																							.	.	.	.
Alig confidence																																																							.	.	.	.
Template Conservation
Template Sequence		A	V	T	E	G	A	Y	R	S	M	L	Q	D	R	E	D	Q	S	I	L	C	T	G	E	S	G	A	G	K	T	E	N	T	K	K	V	I	Q	Y	L	A	H	V	A	S	S	P	K	G	R	K	E	P	G	V	P	G	L	E	R	Q	L	L	Q	A	N	P	I	L	E	A	F	G	N	A	K	T	V	K	N
Template Known Secondary structure																									B	T	T	S	S																S			S	S	S		S	S	S							S	T	T	T	S														S	S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	S	S	R	H	G	K	Y	L	E	M	I	F	N	S	G	G	V	P	V	G	A	K	I	T	N	Y	L	L	E	K	N	R	I	V	N	Q	V	R	N	E	R	N	F	H	I	F	Y	Q	F	T	K	S	A	P	Q	K	Y	R	D	T	Y	G	I	Q	G	P	E	N	Y	V	Y	T	S	A	C	Q	C	L
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		D	N	S	S	R	F	G	K	F	I	R	I	N	F	D	V	A	G	Y	I	V	G	A	N	I	E	T	Y	L	L	E	K	S	R	A	I	R	Q	A	K	D	E	C	S	F	H	I	F	Y	Q	L	L	G	G	A	G	E	Q	L	K	A	D	L	L	L	E	P	C	S	H	Y	R	F	L	T	N	G	P	S	.
Template Known Secondary structure		T	T			S	S										T	T	S														G	G	G	G	T				T	T				B																		T	T				G	G	G		T	T	S	T	T		S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		S	V	D	G	I	S	D	E	K	D	F	Q	G	T	M	N	A	M	K	V	I	G	I	T	E	P	E	Q	D	E	I	F	R	M	L	S	I	I	L	W	L	G	N	I	Q	F	Q	E	.	G	Q	D	G	G	S	V	I	S	D	K	S	I	T	E	F	L	G	Y	L	I	G	V	P	V	A	A	I	E	R	A
Query Conservation																																																		.
Alig confidence		.																																																.
Template Conservation		.
Template Sequence		.	S	S	P	G	Q	E	R	E	L	F	Q	E	T	L	E	S	L	R	V	L	G	F	S	H	E	E	I	I	S	M	L	R	M	V	S	A	V	L	Q	F	G	N	I	A	L	K	R	E	R	N	T	D	Q	A	T	M	P	D	N	T	A	A	Q	K	L	C	R	L	L	G	L	G	V	T	D	F	S	R	A
Template Known Secondary structure		.	S	S	T	T	T															T	T																			G	G	G							S	S	S						S												T	T
Template Predicted Secondary structure		.
Template SS confidence
			291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	I	R	I	M	Q	T	Q	H	G	A	R	R	G	S	V	Y	E	V	P	L	N	P	T	Q	A	L	A	V	R	D	A	L	S	M	A	I	Y	N	C	L	F	D	W	I	V	E	R	V	N	K	A	L	V	T	S	D	N	S	V	S	N	S	I	G	I	L	D	I	Y	G	F	E	I	F	E	N	N	S
Query Conservation
Alig confidence										.	.	.	.	.
Template Conservation										.	.	.	.	.
Template Sequence		L	L	T	P	R	I	K	V	.	.	.	.	.	G	R	D	Y	V	Q	K	A	Q	T	K	E	Q	A	D	F	A	L	E	A	L	A	K	A	T	Y	E	R	L	F	R	W	L	V	L	R	L	N	R	A	L	D	R	S	P	R	Q	G	A	S	F	L	G	I	L	D	I	A	G	F	E	I	F	Q	L	N	S
Template Known Secondary structure				S					S	.	.	.	.	.	S	S	S																																										S				S											B				S	S	B
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		370	.	.	.	.	.	.	.						.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure																																												.													.
Query SS confidence																																												.													.
Query Sequence		F	E	Q	L	C	I	N	Y	V	N	E	K	L	Q	Q	I	F	I	E	L	T	L	K	T	E	Q	E	E	Y	V	R	E	Q	I	A	W	T	P	I	K	Y	F	.	N	N	K	V	V	C	D	L	I	E	S	K	.	R	P	P	G	L	F	A	A	M	N	D	A	I	A	T	A	H	A	D	S	A	A	A	D
Query Conservation																																												.													.
Alig confidence																																												.													.																		.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		F	E	Q	L	C	I	N	Y	T	N	E	K	L	Q	Q	L	F	N	H	T	M	F	V	L	E	Q	E	E	Y	Q	R	E	G	I	P	W	T	F	L	D	F	G	L	D	L	Q	P	C	I	D	L	I	E	R	P	A	N	P	P	G	L	L	A	L	L	D	E	E	C	W	F	P	K	.	.	.	.	A	T	D
Template Known Secondary structure																							T										T	T									S														S	S	S										S	S	S	S	T	T	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.					.	.	520
		504	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.						.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.					.
Predicted Secondary structure										.											.	.	.	.	.																																																				.	.	.	.
Query SS confidence										.											.	.	.	.	.																																																				.	.	.	.
Query Sequence		S	A	F	A	Q	R	L	N	.	F	L	S	S	N	P	H	F	E	Q	.	.	.	.	.	R	Q	N	Q	F	I	V	K	H	Y	A	G	D	V	T	Y	S	I	T	G	M	T	D	K	N	K	D	Q	L	A	T	D	I	L	N	L	I	H	S	S	N	N	E	F	M	K	S	I	F	P	V	.	.	.	.	A
Query Conservation										.											.	.	.	.	.																																																				.	.	.	.
Alig confidence										.											.	.	.	.	.																																																				.	.	.	.
Template Conservation
Template Sequence		K	S	F	V	E	K	V	A	Q	E	Q	G	G	H	P	K	F	Q	R	P	R	H	L	R	D	Q	A	D	F	S	V	L	H	Y	A	G	K	V	D	Y	K	A	N	E	W	L	M	K	N	M	D	P	L	N	D	N	V	A	A	L	L	H	Q	S	T	D	R	L	T	A	E	I	W	K	D	V	E	G	I	V
Template Known Secondary structure													T	T	S	T	T						T	T	T			S	S						T	T								T	T																			T		S	S							T	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	S	N	S	R	R	R	P	P	T	A	G	D	R	I	K	T	S	A	N	D	L	V	E	T	L	M	K	C	Q	P	S	Y	I	R	T	I	K	P	N	Q	T	K	S	P	N	D	Y	D	Q	Q	M	V	L	H	Q	I	K	Y	L	G	L	Q	E	N	I	R	I	R	R	A	G	F	A	Y	R	Q	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	E	Q	R	R	G	M	F	R	T	V	G	Q	L	Y	K	E	S	L	S	R	L	M	A	T	L	S	N	T	N	P	S	F	V	R	C	I	V	P	N	H	E	K	R	A	G	K	L	E	P	R	L	V	L	D	Q	L	R	C	N	G	V	L	E	G	I	R	I	C	R	Q	G	F	P	N	R	I	L	F
Template Known Secondary structure		S							S	S																				T	S												S	S			T	T				T	T	T									T											S
Template Predicted Secondary structure
Template SS confidence
		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.			720	.	.	.	.	.	.	.	.	.	730	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		D	T	F	A	Q	R	F	A	V	L	S	G	K	T	S	Y	A	G	E	Y	T	W	Q	G	D	D	K	S	A	C	E	Q	I	L	K	D	T	N	I	P	S	S	E	Y	Q	M	G	T	S	K	V	F	I	K	N	P	E	T	L	F	A	L	E	D	M	R	.	.	D	K	F	W	D	T	M	A	T	R	I	Q
Query Conservation																																																																				.	.
Alig confidence																	.	.	.	.																																					.											.	.
Template Conservation																	.	.	.	.																																					.
Template Sequence		Q	E	F	R	Q	R	Y	E	I	L	T	P	N	A	I	.	.	.	.	P	K	G	F	M	D	G	K	Q	A	C	E	K	M	I	Q	A	L	E	L	D	P	N	L	Y	R	V	G	Q	S	K	I	F	F	R	A	.	G	V	L	A	Q	L	E	E	E	R	A	S	E	Q	T	K	S	D	Y	L	K	R	A	N
Template Known Secondary structure									G	G	G	S	T	T	T	S	.	.	.	.		S					S			S				S				S	S				S	S					S	S		T	T				.
Template Predicted Secondary structure																	.	.	.	.																																					.
Template SS confidence
		694	.	.	.	.	.	700	.	.	.	.	.	.	.	.					.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.		.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.
		732	.	.	.	.	.	.	.	740	.	.	.															.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	W	R	S	Y	V	R	R	R	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	A	C	I	Q	K	L	W	N	R	N	K	V	N	M	E	L	E	R	V	R	N	E	G	T	K	L	L	Q	G	K	K	Q	R	R	R	Y	S	I	L	G	S	R	K	F	Y	G	D	Y	L	S	A	S
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	V	Q	W	I	N	D	K	Q	A	S	L	E	S	R	D	F	G	D	S	I	E	S	V	Q	S	F	M	N	A	H	K	E	Y	K	K	T	E	K	P	P	K	G	Q	E	V	S	E	L	E	A	I	Y	N	S	L	Q	T	K	L	R	L	I	K	R	E	P	F	V	A	P	A	G	L	T	P	N	E	I
Template Known Secondary structure							T	T	T	T	T				S																			T	T					T													S	S	S						S	S		S	S	T
Template Predicted Secondary structure
Template SS confidence
		769	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.
		798	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	N	G	T	L	W	N	T	C	G	L	S	Q	N	D	H	V	I	F	S	M	R	C	E	V	L	V	H	K	L	G	R	T	S	K	P	S	P	R	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	T	W	S	A	L	E	K	A	E	Q	E	H	A	E	A	L	R	I	E	L	K	R	Q	K	K	I	A	V	L	L	Q	K	Y	N	R	I	L	K	K	L
Template Known Secondary structure																																T	T	T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		849	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890