Job Description Q9Y7Z8 Confidence 100.00% Date Sun Jul 8 12:04:58 BST 2012 Rank 4 Aligned Residues 705 % Identity 35% Template c2otgA_ PDB info PDB header:contractile protein Chain: A: PDB Molecule:myosin heavy chain; PDBTitle: rigor-like structures of muscle myosins reveal key2 mechanical elements in the transduction pathways of this3 allosteric motor Resolution 3.12 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	T	S	T	R	K	K	T	V	G	V	D	D	L	T	L	L	S	K	I	T	D	E	E	I	N	K	N	L	E	L	R	F	R	N	G	E	I	Y	T	Y	I	G	H	V	L	I	S	V	N	P	F	R	D	L	G	I	Y	T	M	D	I	L	K	S	Y	Q	G	K	N	R	L	E	T	S	P	H	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	Q	M	N	P	P	K	F	E	K	L	E	D	M	A	N	M	T	Y	L	N	E	A	S	V	L	N	N	L	R	G	R	Y	T	A	G	L	I	Y	T	Y	S	G	L	F	C	I	A	V	N	P	Y	R	R	L	P	I	Y	T	D	S	V	I	A	K	Y	R	G	K	R	K	T	E	I	P	P	H	L	F
Template Known Secondary structure								G	G	G	T	T		S	B	T	T	S		S	S		S													T	T	T							T	T								S	S			G	G	G									T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	E	N	A	Y	Y	Q	M	K	S	Y	H	E	N	Q	C	I	I	I	S	G	E	S	G	A	G	K	T	E	A	A	K	R	I	M	Q	Y	I	T	H	V	S	K	S	V	G	T	E	I	E	R	V	S	E	I	I	L	A	T	N	P	L	L	E	S	F	G	C	A	K	T	L	R	N	N	N	S	S
Query Conservation
Alig confidence																																																			.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		S	V	A	D	N	A	Y	Q	N	M	V	T	D	R	E	N	Q	S	C	L	I	T	G	E	S	G	A	G	K	T	E	S	T	K	K	V	I	M	Y	F	A	R	V	A	A	N	L	S	N	.	.	.	.	L	E	D	Q	I	I	E	A	N	P	V	L	E	A	F	G	N	A	K	T	V	R	N	N	N	S	S
Template Known Secondary structure															T										S	T	T	S	S														T	T	S						.	.	.	.																					S	S		T	T
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		R	H	G	K	Y	L	E	M	I	F	N	S	G	G	V	P	V	G	A	K	I	T	N	Y	L	L	E	K	N	R	I	V	N	Q	V	R	N	E	R	N	F	H	I	F	Y	Q	F	T	K	S	A	P	Q	K	Y	R	D	T	Y	G	I	.	Q	G	P	E	N	Y	V	Y	T	S	A	C	Q	C	L	S	V	D
Query Conservation																																																															.
Alig confidence																																																															.													.
Template Conservation																																																																												.
Template Sequence		R	F	G	K	F	I	R	I	H	F	G	P	T	G	K	I	A	G	A	D	I	E	T	Y	L	L	E	K	S	R	V	T	Y	Q	Q	S	A	E	R	N	Y	H	I	F	Y	Q	I	C	S	N	A	I	P	E	L	N	E	V	M	L	I	T	P	D	S	G	L	Y	S	F	I	N	Q	G	.	C	L	T	V	D
Template Known Secondary structure			S										T	T	S															G	G	G	T				T	T			S	B							T	T	T	S	S								T			S		G	G	G		T	T	T	S	S	S	.					T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		G	I	S	D	E	K	D	F	Q	G	T	M	N	A	M	K	V	I	G	I	T	E	P	E	Q	D	E	I	F	R	M	L	S	I	I	L	W	L	G	N	I	Q	F	Q	E	.	G	Q	D	G	G	S	V	I	S	D	K	S	I	T	E	F	L	G	Y	L	I	G	V	P	V	A	A	I	E	R	A	L	T	I
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		N	I	D	D	V	E	E	F	K	L	C	D	E	A	F	D	I	L	G	F	T	K	E	E	K	T	S	M	F	K	C	T	A	S	I	L	H	M	G	E	M	K	F	K	Q	R	P	R	E	E	Q	A	E	S	D	G	T	A	E	A	E	K	V	A	F	L	C	G	I	N	A	G	D	L	L	K	A	L	L	K
Template Known Secondary structure		T																		T																				T	T							S	S	S	S					S		S											T	S											S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	M	Q	T	Q	H	G	A	R	R	G	S	V	Y	E	V	P	L	N	P	T	Q	A	L	A	V	R	D	A	L	S	M	A	I	Y	N	C	L	F	D	W	I	V	E	R	V	N	K	A	L	V	T	S	D	N	S	V	S	N	S	I	G	I	L	D	I	Y	G	F	E	I	F	E	N	N	S	F	E	Q
Query Conservation
Alig confidence							.	.	.	.	.																																																		.
Template Conservation							.	.	.	.	.																																																		.
Template Sequence		P	K	V	K	V	.	.	.	.	.	G	T	E	M	V	T	K	G	Q	N	L	Q	Q	V	I	N	S	V	G	A	L	S	K	S	L	Y	D	R	M	F	N	W	L	V	K	R	V	N	R	T	L	D	T	K	A	K	R	N	Y	.	Y	I	G	V	L	D	I	A	G	F	E	I	F	D	F	N	S	F	E	Q
Template Known Secondary structure							.	.	.	.	.	T	T	S								S																																							.														S	S
Template Predicted Secondary structure							.	.	.	.	.																																																		.
Template SS confidence
		401	.	.	.	.						.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		L	C	I	N	Y	V	N	E	K	L	Q	Q	I	F	I	E	L	T	L	K	T	E	Q	E	E	Y	V	R	E	Q	I	A	W	T	P	I	K	Y	F	.	N	N	K	V	V	C	D	L	I	E	S	K	R	P	P	G	L	F	A	A	M	N	D	A	I	A	T	A	H	A	D	S	A	A	A	D	S	A	F	A
Query Conservation																																									.
Alig confidence																																									.												.	.																	.	.	.	.
Template Conservation																																																					.	.																	.	.	.	.
Template Sequence		L	C	I	N	Y	T	N	E	R	L	Q	Q	F	F	N	H	H	M	F	V	L	E	Q	E	E	Y	K	K	E	G	I	Q	W	E	F	I	D	F	G	M	D	L	Q	M	C	I	D	L	I	E	K	.	.	P	M	G	I	L	S	I	L	E	E	E	C	M	F	P	K	.	.	.	.	A	D	D	K	S	F	Q
Template Known Secondary structure																														T	S								S	S	S											S	.	.	T	T	S										S		T	T	.	.	.	.
Template Predicted Secondary structure																																																					.	.																	.	.	.	.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.			.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.					.	.	.	.	.	.	.
		508	.	510	.		.	.	.	.	.	.	.	.											520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure						.									.	.	.	.	.	.	.	.	.	.
Query SS confidence						.									.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	L	N	.	F	L	S	S	N	P	H	F	.	.	.	.	.	.	.	.	.	.	E	Q	R	Q	N	Q	F	I	V	K	H	Y	A	G	D	V	T	Y	S	I	T	G	M	T	D	K	N	K	D	Q	L	A	T	D	I	L	N	L	I	H	S	S	N	N	E	F	M	K	S	I	F	P	V	A	E	E	S
Query Conservation						.									.	.	.	.	.	.	.	.	.	.
Alig confidence						.									.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		D	Y	S	Y	Q	N	H	I	G	K	N	R	M	F	T	K	P	G	K	P	T	R	P	N	Q	G	H	A	H	F	E	L	H	H	Y	A	G	N	V	P	Y	S	I	A	G	W	L	D	K	N	K	D	P	I	N	E	N	V	V	S	L	L	A	V	S	K	E	P	L	V	A	E	L	F	.	.	.	.	.	.
Template Known Secondary structure							T	T	T	T	T		S	S						S		S	S	T	T					S						T	T								T	T						S													T		S	S							T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	R	R	R	P	P	T	A	G	D	R	I	K	T	S	A	N	D	L	V	E	T	L	M	K	C	Q	P	S	Y	I	R	T	I	K	P	N	Q	T	K	S	P	N	D	Y	D	Q	Q	M	V	L	H	Q	I	K	Y	L	G	L	Q	E	N	I	R	I	R	R	A	G	F	A	Y	R	Q	A	F	D	T	F
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	R	A	P	D	Q	T	I	S	A	V	H	R	E	S	L	N	K	L	M	C	N	L	R	R	T	N	P	H	F	V	R	C	I	I	P	N	L	E	K	D	P	G	L	V	D	A	E	L	V	L	H	Q	L	Q	C	N	G	V	L	E	G	I	R	I	C	R	K	G	F	P	S	R	L	I	Y	S	E	F
Template Known Secondary structure		.	.																							T	T	S	B											S	S			T	T															S	T	T								T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	R	F	A	V	L	S	G	K	T	S	Y	A	G	E	Y	T	W	Q	G	D	D	K	S	A	C	E	Q	I	L	K	D	T	N	I	P	S	S	E	Y	Q	M	G	T	S	K	V	F	I	K	N	P	E	T	L	F	A	L	E	D	M	R	D	K	F	W	D	T	M	A	T	R	I	Q	R	A	W	R	S
Query Conservation
Alig confidence																.	.	.	.	.	.	.																																.
Template Conservation																.	.	.	.	.	.	.																																.
Template Sequence		K	Q	R	Y	S	I	L	A	P	N	A	I	P	Q	.	.	.	.	.	.	.	D	G	K	T	V	S	E	K	I	L	T	G	L	Q	M	D	P	S	E	Y	R	L	G	T	T	K	V	F	F	K	A	.	G	V	L	G	N	L	E	E	M	R	D	E	R	L	S	K	I	I	S	M	F	Q	A	H	I	R	G
Template Known Secondary structure						G	G	G	S	G	G	G				.	.	.	.	.	.	.													T	T			T	T	T					S	S						T	.	T
Template Predicted Secondary structure																.	.	.	.	.	.	.																																.
Template SS confidence
		717	.	.	720	.	.	.	.	.	.	.	.	.	730								.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.		.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.
		737	.	.	740	.	.	.									.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence		Y	V	R	R	R	S	E	.	.	.	.	.	.	.	.	A	A	A	C	I	Q	K	L	W	N	R	N	K	V	N	M	E	L	E	R	V	R	N	E	G
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	I	R	K	A	Y	K	K	L	Q	D	Q	R	I	G	L	S	V	I	Q	R	N	I	R	K	W	L	V	L	R	N	W	Q	W	W	K	L	Y	A
Template Known Secondary structure																																T	T								T
Template Predicted Secondary structure
Template SS confidence
		792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.