Job Description Q9Y7Z8 Confidence 75.52% Date Sun Jul 8 12:04:58 BST 2012 Rank 500 Aligned Residues 104 % Identity 26% Template c2h58A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:kinesin-like protein kifc3 variant; PDBTitle: crystal structure of the kifc3 motor domain in complex with2 adp Resolution 1.85 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.											.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	V	Y	A	I	A	E	N	A	Y	Y	Q	M	K	S	Y	H	E	N	Q	C	I	I	I	S	G	E	S	G	A	G	K	T	E	A	.	.	.	.	.	.	.	.	.	.	A	K	R	I	M	Q	Y	I	T	H	V	S	K	S	V	G	T	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.																					.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.
Template Sequence		D	V	F	Q	E	V	Q	A	L	V	T	S	C	I	.	D	G	F	N	V	C	I	F	A	Y	G	Q	T	G	A	G	K	T	Y	T	M	E	G	T	A	E	N	P	G	I	N	Q	R	A	L	Q	L	L	F	S	E	V	Q	E	K	A	S	D	W	E	Y	T	I	T	V	S	A	A	E	I	Y	N	E	V	L
Template Known Secondary structure					T	T	T									.	T	T									S	S	T	T	S	S						T	B		S	S	S	B																T	S		T	T														T	T
Template Predicted Secondary structure																.
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
																																				162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	V	S	E	I	I	L	A	T	N	P	L	L	E	S	F	G	C	A	K	T	L	R	N	N	N	S	S	R	H	G	K	Y	L	E	M	I	F	.	.	.	.	N	S	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation
Template Sequence		R	D	L	L	G	K	E	P	Q	E	K	L	E	I	R	L	C	P	D	G	S	G	Q	L	Y	V	P	G	L	T	E	F	Q	V	Q	S	V	D	D	I	N	K	V	F	E	F	G	H	T	N	R	T	T	E	F	T	N	L	N	E	H	S	S	R	S	H	A	L	L	I	V	T	V	R	G	V	D	C	S	T
Template Known Secondary structure				T	T	S		S	S										T	T	S	S						T	T								S															T	T		T	T			S		S		G	G	G	S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
		204	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	P	V	G	A	K	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	R	T	T	G	K	L	N
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		663	.	.	.	.	.	.	670	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions