 |
| Job Description | Q9Y7Z8 | | Confidence | 87.13% | Date | Sun Jul 8 12:04:58 BST 2012 |
| Rank | 362 | Aligned Residues | 65 |
| % Identity | 23% | Template | c1w36G_ |
| PDB info |
PDB header:recombination | Chain: G: PDB Molecule:exodeoxyribonuclease v alpha chain; |
PDBTitle: recbcd:dna complex
|
| Resolution | 3.1 Å |
|
 |
|   |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | N | A | Y | Y | Q | M | K | S | Y | H | E | N | Q | C | I | I | I | S | G | E | S | G | A | G | K | T | E | A | A | K | R | I | M | Q | Y | I | T | H | V | S | K | S | V | G | T | E | I | E | R | V | S | E | I | I | L | A | T | N | P | L | L | E | S | F | G | C | A |
| Query Conservation |   |
  |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|   |   |   |   |   |   |   | . | . | . |   |   |
|
|   |
|   |
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
| Template Sequence |   |
K | V | A | A | A | V | A | L | T | R | R | . |
. |
. |
I | S | V | I | S | G | G | P | G | T | G | K | T | T | T | V | A | K | L | L | A | A | L | I | Q | M | A | D | G | E | R | C | R | I | R | L | A | A | P | T | G | K | A | A | A | R | L | T | E | S | L | G | K | A |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | B | S | . | . | . |  |  |  |  |  |
|
| T | T | S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S | S |
|
|
|  |  |  |  | B | S | S |  |  |  |  |  |  |  |  |  |  |  | T |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
155 | . | . | . | . | 160 | . | . | . | . | . | |
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|