Job Description Q9Y7Z8 Confidence 87.57% Date Sun Jul 8 12:04:58 BST 2012 Rank 348 Aligned Residues 197 % Identity 12% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		961	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	P	P	T	S	K	S	K	P	F	P	R	L	A	T	G	G	S	T	A	A	A	R	G	P	R	P	V	V	Q	N	K	P	A	A	T	K	P	V	S	M	P	A	A	K	S	K	P	A	P	M	A	N	P	V	S	T	A	Q	Q	T	Q	N	R	P	P	A	P	A	M	Q	A	R	P	N	T	T	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	P	A	A	T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A
Template Known Secondary structure																																			S										S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		1041	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	P	V	T	S	T	T	T	T	I	K	Q	A	T	T	V	S	A	S	K	P	A	P	S	T	V	T	S	A	A	S	S	P	S	N	I	S	K	P	S	A	P	V	A	N	N	V	S	K	P	S	A	V	P	P	P	P	P	P	P	P	A	E	V	E	K	K	D	L	Y	L	A	L	Y	D	F	A	G	R
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	.	.	.	.	.	.	.	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T
Template Known Secondary structure							S	S																																.	.	.	.	.	.	.																S	S			T	T								S	S		B
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.								.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		1121	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.						1140	.	.	.	.	.	.											.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	N	E	M	T	I	K	K	D	E	I	I	E	I	V	Q	K	E	.	.	.	.	.	P	S	G	W	W	L	A	.	.	.	.	.	.	.	.	.	.	L	K	N	G	A	E	G	W	V	P	A	T	Y	V	T	E	Y	K
Query Conservation																					.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V	P
Template Known Secondary structure		S	T	T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions