Job Description A6X978 Confidence 12.69% Date Sun Jul 8 11:45:02 BST 2012 Rank 3 Aligned Residues 40 % Identity 33% Template c3mkoA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:glycoprotein c; PDBTitle: crystal structure of the lymphocytic choriomeningitis virus membrane2 fusion glycoprotein gp2 in its postfusion conformation Resolution 1.80 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	L	Y	E	I	I	S	I	A	L	N	P	C	N	F	S	K	S	L	F	W	L	R	K	K	I	K	N	S	V	L	L	K	T	S	F	D	S	N	E	T	I	F
Query Conservation
Alig confidence													.	.						.	.
Template Conservation													.	.						.	.
Template Sequence		N	H	L	R	D	L	M	G	V	P	Y	.	.	C	N	Y	S	K	.	.	F	W	Y	L	E	H	A	P	K	C	W	L	V	T	N	G	S	Y	L	N	E	T	H	F
Template Known Secondary structure			T		G	G	G	T	T			B	.	.						.	.										S	B				T	T
Template Predicted Secondary structure													.	.						.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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