10/01/2012 08:40:17 : INFO  : Run start: Tue Jan 10 08:40:16 GMT 2012
10/01/2012 08:40:20 : INFO  : Initialised job
10/01/2012 08:40:21 : INFO  : Renaming log file 'phyre2_20120110_084016.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/fdf87eea3cebc983/phyre_20120110_084016.log'
10/01/2012 08:40:22 : INFO  : Initialised job:
Sequence
>batch____
MTYMKLTAAKRIVFFIYLFVIQFWKNASFQTKVS

10/01/2012 08:40:23 : INFO  : Checked sequence
10/01/2012 08:40:26 : INFO  : Finding homologues with PSI-BLAST
10/01/2012 08:40:26 : INFO  : PSI-BLAST 3 iterations
10/01/2012 08:40:50 : INFO  : PSI-BLAST 5 iterations
10/01/2012 08:41:16 : INFO  : Finished PSI-BLAST
10/01/2012 08:41:17 : INFO  : Running Buildali to generate a3m file
10/01/2012 08:42:10 : INFO  : Converting to HMM
10/01/2012 08:42:11 : INFO  : Calibrating HMM
10/01/2012 08:42:17 : INFO  : Searching HMM database
10/01/2012 08:43:40 : INFO  : Finished buildali
10/01/2012 08:43:41 : INFO  : Predicting secondary structure
10/01/2012 08:43:46 : INFO  : Predicted secondary structure (PSI-Pred)
10/01/2012 08:43:48 : INFO  : Predicting Disordered regions
10/01/2012 08:43:50 : INFO  : Predicted Disorder (Disopred)
10/01/2012 08:43:51 : INFO  : Running memsat_svm check
10/01/2012 08:45:22 : INFO  : Globular protein
10/01/2012 08:45:23 : INFO  : Predicted Transmembrane (memsat_svm) ID 'fdf87eea3cebc983'
10/01/2012 08:45:24 : INFO  : Initialising fold library search
10/01/2012 08:45:26 : INFO  : Initialised search input
10/01/2012 08:45:27 : INFO  : Building Ensemble models
10/01/2012 08:45:30 : INFO  : Building hh.d2axti1.model.1.pdb
10/01/2012 08:45:40 : INFO  : Building d2axti1.1.pdb
10/01/2012 08:45:49 : INFO  : Building c2vlaA_.2.pdb
10/01/2012 08:45:58 : INFO  : Building d1ig0a2.3.pdb
10/01/2012 08:46:07 : INFO  : Building d1a21a2.4.pdb
10/01/2012 08:46:16 : INFO  : Building c1y4eA_.5.pdb
10/01/2012 08:46:25 : INFO  : Building c1p58F_.6.pdb
10/01/2012 08:46:35 : INFO  : Building d2a2qt2.7.pdb
10/01/2012 08:46:44 : INFO  : Building c3p04B_.8.pdb
10/01/2012 08:46:53 : INFO  : Building c1p0jA_.9.pdb
10/01/2012 08:47:02 : INFO  : Building c1ot0A_.10.pdb
10/01/2012 08:47:11 : INFO  : Building c1p84D_.11.pdb
10/01/2012 08:47:20 : INFO  : Building d1xrda1.12.pdb
10/01/2012 08:47:29 : INFO  : Building c3p04A_.13.pdb
10/01/2012 08:47:40 : INFO  : Building d1yo5c1.14.pdb
10/01/2012 08:47:49 : INFO  : Building d1puee_.15.pdb
10/01/2012 08:47:58 : INFO  : Building d2c9aa1.16.pdb
10/01/2012 08:48:06 : INFO  : Building d1duxc_.17.pdb
10/01/2012 08:48:15 : INFO  : Building d1flia_.18.pdb
10/01/2012 08:48:24 : INFO  : Building d2bl7a1.19.pdb
10/01/2012 08:48:32 : INFO  : Building c1btqA_.20.pdb
10/01/2012 08:48:53 : INFO  : Finished HH model building
10/01/2012 08:48:54 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
10/01/2012 08:50:24 : INFO  : html domain output complete ID 'fdf87eea3cebc983'
10/01/2012 08:52:36 : INFO  : Run end  : Tue Jan 10 08:52:36 GMT 2012
