Phyre 2 alignment of C1P620 with c1p58F_

Return to main results | Retrieve Phyre Job Id

Job Description | C1P620
Confidence | 0.81% | Date | Thu Jan 5 10:56:18 GMT 2012
Rank | 37 | Aligned Residues | 15
% Identity | 33% | Template | c1p58F_
PDB info | PDB header:virus | Chain: F: PDB Molecule:envelope protein m; | PDBTitle: complex organization of dengue virus membrane proteins as revealed by2 9.5 angstrom cryo-em reconstruction
Resolution | 9.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | Q | T | A | V | A | A | V | L | C | A | A | M | I | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | G | F | T | I | M | A | A | I | L | A | Y | T | I | G
Template Known Secondary structure |  | T | T |  |  |  |  |  |  |  | T | G | G | G | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions