Job Description A2P2R3 Confidence 99.94% Date Mon Jul 2 19:10:01 BST 2012 Rank 12 Aligned Residues 197 % Identity 17% Template c3mdnD_ PDB info PDB header:transferase Chain: D: PDB Molecule:glutamine aminotransferase class-ii domain protein; PDBTitle: structure of glutamine aminotransferase class-ii domain protein2 (spo2029) from silicibacter pomeroyi Resolution 2.09 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	I	F	G	Y	C	N	F	L	I	E	K	T	R	G	E	I	I	D	T	L	I	E	G	L	Q	A	L	E	Y	K	E	Y	D	S	S	G	I	S	I	Q	G	D	E	L	E	S	L	N	I	Y	K	Q	T	G	K	I	S	S	L	K	E	E	I	D	L	Y	N	L	N	K	N	L	P	F	I	S	H	C
Query Conservation
Alig confidence										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																						.	.	.	.	.
Template Conservation										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																						.	.	.	.	.
Template Sequence		C	R	W	A	A	Y	H	G	.	.	T	P	I	F	L	E	D	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	V	A	W	Y	D	A	R	P	E	.	P	G	L	Y	R	D	V	Y	P	A	W	S	D	P	N	L	R	A	V	A	H	.	.	.	.	.	H	V	R	S	G	L
Template Known Secondary structure										.	.					G	G	G	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S	S	S	.							S	S		T	T	T										.	.	.	.	.
Template Predicted Secondary structure										.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																						.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.			10	.	.	.	.	.	.	.	.																		.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		G	I	A	H	T	R	R	A	T	H	G	G	L	R	R	A	N	C	H	P	H	N	S	D	P	S	N	E	F	V	V	V	H	N	G	V	I	T	N	F	A	N	L	K	A	L	L	M	A	K	G	.	.	.	.	.	Y	V	F	K	S	D	T	D	T	E	C	I	P	K	L	Y	K	H	I	Y	D	T	S	I
Query Conservation																																																					.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.								.	.	.																										.	.	.	.	.																							.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.								.	.	.																																																					.	.
Template Sequence		F	L	S	H	V	N	.	.	.	.	.	.	.	.	.	.	N	C	H	P	F	A	A	.	.	.	R	R	W	C	F	X	H	N	G	Q	V	G	G	F	E	A	F	R	K	Q	A	D	X	A	I	A	D	E	F	Y	T	Y	R	K	G	S	T	D	S	E	V	L	F	L	L	A	L	S	E	G	L	E	.	.
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.			S					.	.	.	T	T										T	T	G	G	G	G							T	S						T	T			S														T	T	T	T	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.								.	.	.																																																					.	.
Template SS confidence
		82	.	.	.	.	.											.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.												.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.											.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	G	Y	N	L	D	F	H	V	L	T	N	L	V	L	K	E	L	E	G	.	.	.	.	.	.	.	.	.	.	.	S	Y	G	L	L	C	T	S	S	H	F	P	D	E	V	V	A	A	R	K	G	S	P	L	V	I	G	.	.	.	.	.	.	.	.	.	.	V	K	G	K	T	D	M	D	V	N	F
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	H	D	P	H	G	A	L	A	R	A	I	A	R	L	E	G	L	S	R	A	H	G	T	T	P	H	X	R	L	S	A	A	F	S	D	G	Q	T	L	Y	A	A	R	Y	S	S	D	H	I	A	P	S	V	Y	Y	R	Y	S	H	A	R	Q	G	W	A	V	V	S	E	P	L	E	T	D	E
Template Known Secondary structure		.	.	.	.	.	T																					S		S	S	S										S	S									S	S	S											T	T	T	T						S	S					S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	E	Y	L	D	Q	E	E	D	Y	L	K	L	N	T	Q	T	K	S	S	G	N	V	L	A	A	A
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		G	D	W	T	.	E	L	R	P	G	R	X	L	T	I	G	A	E	G	A	A	E	R	D	F	A	P	A	D
Template Known Secondary structure						.				T	T							T	T
Template Predicted Secondary structure						.
Template SS confidence
		232	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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