 |
| Job Description | A2P2R3 | | Confidence | 7.13% | Date | Mon Jul 2 19:10:01 BST 2012 |
| Rank | 57 | Aligned Residues | 105 |
| % Identity | 9% | Template | c1qduI_ |
| PDB info |
PDB header:hydrolase/hydrolase inhibitor | Chain: I: PDB Molecule:caspase-8 alpha-chain; |
PDBTitle: crystal structure of the complex of caspase-8 with the tripeptide2 ketone inhibitor zevd-dcbmk
|
| Resolution | 2.80 Å |
|
 |
|   |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | N | C | H | P | H | N | S | D | P | S | N | E | F | V | V | V | H | N | G | V | I | T | N | F | A | N | L | K | A | L | L | M | A | K | G | Y | V | F | K | S | D | T | D | T | E | C | I | P | K | L | Y | K | H | I | Y | D | T | S | I | E | L | G | Y | . |
. |
N | L | D | F | H | V | L | T | N | L | V | L | K | E |
| Query Conservation |   |
  |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|   |
|   |
|   |   |
|
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |
|
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
| Template Sequence |   |
D | K | V | Y | Q | M | K | S | K | P | R | G | Y | C | L | I | I | N | N | H | N | F | A | K | A | R | E | K | V | P | K | L | H | S | I | R | D | R | N | G | T | H | L | D | A | G | A | L | T | T | T | F | E | E | L | H | F | E | I | K | P | H | H | D | C | T | V | E | Q | I | Y | E | I | L | K | I | Y | Q | L | M |
| Template Known Secondary structure |   |
|
|
|
|
|
|
|
| S | S |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | S |
| G | G | G | T | T |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
175 | . | . | . | . | |
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
| Predicted Secondary structure |   |
|
|
|  |  | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | E | G | S | Y | . |
. |
G | L | L | C | T | S | S | H | F | P | D | E | V | V | A | A | R | K | G | S | P | L |
| Query Conservation |   |
|   |
|   |
| . | . |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
| Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |
| Template Sequence |   |
D | H | S | N | M | D | C | F | I | C | C | I | L | S | H | G | D | K | G | I | I | Y | G | T | D | G | Q | E | A |
| Template Known Secondary structure |   |
| G | G | G |
| S |
|  |  |  |  |  |  | S |
|  |  | T | T |  |  |  |
| T | T | S |
|  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|