 |
| Job Description | P29366 | | Confidence | 20.30% | Date | Mon Jul 2 19:15:38 BST 2012 |
| Rank | 407 | Aligned Residues | 72 |
| % Identity | 10% | Template | d1xo3a_ |
| SCOP info | beta-Grasp (ubiquitin-like)
| MoaD/ThiS
| C9orf74 homolog
|
| Resolution | UNK |
|
 |
|   |   |
475 | . | . | . | . | 480 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 490 | . | . | . | . | . | . | . | . | |
|
|
. | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | |
|
. | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | L | K | T | T | K | I | K | F | Y | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
K | D | D | I | F | A | L | M | L | K | G | D | T | . |
. |
. |
T | Y | K | E | L | R | S | K | I | A | P | R | I | D | T | D | N | F | K | L | Q | T | K | L | F | D | . |
. |
G | S | G | E | E | I | K | T | D | S | Q | V | S | N | I | I |
| Query Conservation |   |
  |   |   |   |   |
|
|
|   |   |   | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|
|
|
|   |   |   |   | . | . | . |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|
|
|   |   | . | . |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|
|   |   |
|   |   |
|   |
| Template Sequence |   |
S | A | A | P | L | C | V | K | V | E | F | G | G | G | A | E | L | L | F | D | G | V | K | K | H | Q | V | A | L | P | G | Q | E | E | P | W | D | I | R | N | L | L | V | W | I | K | K | N | L | L | K | E | R | P | E | L | F | I | Q | G | D | S | V | R | P | G | I | L | V | L | I | N | D | A | D | W | E | L | L | G |
| Template Known Secondary structure |   |
|
| S | S |
|  |  |  |  |  |  |
| S | S | G | G | G | G | G | T | T |
|
|
|  |  |  |  |
|
| S | S | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
| G | G | G | S |
|
| T | T | S |
|
| S | S |  |  |  |  |  | T | T |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
|   |
|   |   |
541 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
| Query Sequence |   |
Q | A | K | L | K | I |
| Query Conservation |   |
  |   |   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |
|
| Template Sequence |   |
E | L | D | Y | Q | L |
| Template Known Secondary structure |   |
T | T | S |
|
|
|
| Template Predicted Secondary structure |   |
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|   |   |
81 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|