 |
| Job Description | P29366 | | Confidence | 96.81% | Date | Mon Jul 2 19:15:38 BST 2012 |
| Rank | 252 | Aligned Residues | 68 |
| % Identity | 7% | Template | d1wi0a_ |
| SCOP info | beta-Grasp (ubiquitin-like)
| CAD & PB1 domains
| PB1 domain
|
| Resolution | UNK |
|
 |
|   |   |
473 | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | |
|
|
. | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | |
. | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | S | G | L | K | T | T | K | I | K | F | Y | Y | K | D | D | . |
. |
. |
I | F | A | L | M | L | K | G | D | T | T | Y | K | E | L | R | S | K | I | A | P | R | I | D | . |
T | D | N | F | K | L | Q | T | K | L | F | D | G | S | G | E | E | I | K | T | D | S | Q | V | S | N | I | I |
| Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
| . | . | . |   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   | . |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |
|
|   |
|   |
|
|
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
| Template Sequence |   |
A | M | E | N | Q | V | L | V | I | R | I | K | I | P | N | S | G | A | V | D | W | T | V | H | S | G | P | Q | L | L | F | R | D | V | L | D | V | I | G | Q | V | L | P | E | A | T | T | T | A | F | E | Y | E | D | E | D | G | D | R | I | T | V | R | S | D | E | E | M | K | A | M | L |
| Template Known Secondary structure |   |
|
| S | S |
|
|  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  | S |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|
| S |
|  |  |  |
|
| T | T |
|
|
|  |  |  | S | S |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|