 |
| Job Description | P29366 | | Confidence | 75.24% | Date | Mon Jul 2 19:15:38 BST 2012 |
| Rank | 311 | Aligned Residues | 71 |
| % Identity | 17% | Template | d1h4ra3 |
| SCOP info | beta-Grasp (ubiquitin-like)
| Ubiquitin-like
| First domain of FERM
|
| Resolution | 1.8 |
|
 |
|   |   |
478 | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | |
|
|
. | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | |
540 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
T | T | K | I | K | F | Y | Y | K | D | D | I | F | A | L | M | L | K | G | D | T | T | Y | K | E | L | R | S | K | I | A | P | R | I | D | T | . |
. |
. |
D | N | F | K | L | Q | T | K | L | F | D | G | S | G | E | E | I | K | T | D | S | Q | V | S | N | I | . |
I | Q | A | K | L | K | I | S | V | H |
| Query Conservation |   |
  |   |
|
|
|   |   |   |   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   | . | . | . |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   | . |
|   |   |   |   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|   |
|
|   |   |
|   |
|   |
|   |   |
|
|
|
|   |   |   |   | . |   |   |   |   |   |
|
|
|
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |
| Template Sequence |   |
T | F | T | V | R | I | V | T | M | D | A | E | M | E | F | N | C | E | M | K | W | K | G | K | D | L | F | D | L | V | C | R | T | L | G | L | R | E | T | W | F | F | G | L | Q | Y | T | I | . |
K | D | T | V | A | W | L | K | M | D | K | K | V | L | D | H | D | V | S | K | E | E | P | V | T | F | H |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  | T | T |
| B |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
| G | G | G |  |  |  |  |  |  |  | . | T | T |  |  |  |  |
|
| T | T | S | B | G | G | G | S | S |
|
|
| S | S | S |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|