 |
| Job Description | P29366 | | Confidence | 98.15% | Date | Mon Jul 2 19:15:38 BST 2012 |
| Rank | 244 | Aligned Residues | 60 |
| % Identity | 22% | Template | c3pvlA_ |
| PDB info |
PDB header:motor protein/protein transport | Chain: A: PDB Molecule:myosin viia isoform 1; |
PDBTitle: structure of myosin viia myth4-ferm-sh3 in complex with the cen1 of2 sans
|
| Resolution | 2.80 Å |
|
 |
|   |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | L | Y | A | I | V | L | Y | D | F | K | A | E | K | A | D | E | L | T | T | Y | V | G | E | N | L | F | I | C | A | H | . |
. |
. |
. |
. |
H | N | C | E | W | F | I | A | K | P | I | G | R | L | G | G | P | G | L | V | P | V | G | F | V | S | I | I | D | I | A | T |
| Query Conservation |   |
  |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |   | . | . | . | . | . |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |
|   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |   |
|
|   |   |   | . | . |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   | . |   |   |   |   |
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
| Template Sequence |   |
S | K | Y | V | V | A | L | Q | D | N | . |
. |
P | N | S | G | F | L | S | F | A | K | G | D | L | I | I | L | D | H | D | T | G | E | Q | V | M | N | S | G | W | A | N | G | I | . |
N | E | R | T | K | Q | R | G | D | F | P | T | D | C | V | Y | V | M | P | T | V | T |
| Template Known Secondary structure |   |
|
|  |  |  |  | S | S |
|
| . | . |
|
|
|
| B |
|
|
|
| T | T |
|  |  |  |  | S | S |
|
|  |  |  |  |  |  | S | S |  |  |  |  |  | . |  | T | T | T |
|
|  |  |  |  |  | G | G | G |  |  |  |
|
|
| S | S |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
| . | . |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1567 | . | . | 1570 | . | . | . | . | . | . | |
|
. | . | . | 1580 | . | . | . | . | . | . | . | . | . | 1590 | . | . | . | . | . | . | . | . | . | 1600 | . | . | . | . | . | . | . | . | . | |
1610 | . | . | . | . | . | . | . | . | . | 1620 | . | . | . | . | . | . | . | . | . | 1630 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|