Job Description P29366 Confidence 20.91% Date Mon Jul 2 19:15:38 BST 2012 Rank 404 Aligned Residues 62 % Identity 16% Template c3pgwP_ PDB info PDB header:splicing/dna/rna Chain: P: PDB Molecule:u1-a; PDBTitle: crystal structure of human u1 snrnp Resolution 4.40 Å

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		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.							.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		I	F	A	L	M	L	K	G	D	T	T	Y	K	E	L	R	S	K	I	A	P	R	I	D	T	D	N	F	K	L	Q	T	K	L	F	D	G	.	.	.	.	.	.	S	G	E	E	I	K	T	D	S	Q	V	S	N	I	I	Q	A	K	L	K	I	S	V	H	D
Query Conservation																																							.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	I	N	N	L	N	E	K	I	K	K	D	E	L	K	K	S	L	Y	A	I	F	S	Q	F	G	Q	I	L	D	I	L	V	S	R	S	L	K	M	R	G	Q	A	F	V	I	F	K	E	V	S	S	A	T	N	A	L	R	S	M	Q	G	F	P	F	Y	D
Template Known Secondary structure						S			T	T	S														T	T	T	S		B	S			B				S	T	T	T	S	S						B	S	S										T	T	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions