Job Description P29366 Confidence 98.77% Date Mon Jul 2 19:15:38 BST 2012 Rank 229 Aligned Residues 99 % Identity 20% Template c3p0cA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:nischarin; PDBTitle: nischarin px-domain Resolution 2.27 Å

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		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	K	A	S	V	E	S	F	G	L	E	D	E	K	Y	W	F	L	V	C	C	E	L	S	N	G	K	T	R	Q	L	K	R	Y	Y	Q	D	F	Y	D	L	Q	V	Q	L	L	D	A	F	P	A	E	A	G	K	L	R	D	A	G	G	Q	W	S	K	R	I	M	P	Y	I	P	G	P	V	P	Y	V	T	.
Query Conservation																																																																																	.
Alig confidence																								.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																								.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	A	R	V	V	G	S	E	L	V	D	T	Y	T	V	Y	I	I	Q	V	T	.	D	G	S	H	E	W	T	V	K	H	R	Y	S	D	F	H	D	L	H	E	K	L	V	A	E	R	K	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	L	L	P	P	K	K	I	I	G	K	N
Template Known Secondary structure												S	S	S	S									.		S	S																						T	T	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S								S
Template Predicted Secondary structure																								.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																.	.	70	.	.	.	.	.	.	.	.	.	80
			363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	S	I	T	K	K	R	K	E	D	L	N	I	Y	V	A	D	L	V	N	L	P	D	Y	I	S	R	S	E	M	V	H	S	L	F	V	V
Query Conservation		.
Alig confidence		.																					.
Template Conservation																							.
Template Sequence		S	R	S	L	V	E	K	R	E	K	D	L	E	V	Y	L	Q	K	L	L	A	.	A	F	P	G	V	T	P	R	V	L	A	H	F	L	H	F
Template Known Secondary structure			S		S																		.	T	S		S												S
Template Predicted Secondary structure																							.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions