Job Description P29366 Confidence 69.60% Date Mon Jul 2 19:15:38 BST 2012 Rank 319 Aligned Residues 44 % Identity 14% Template c3m63B_ PDB info PDB header:ligase/protein binding Chain: B: PDB Molecule:ubiquitin domain-containing protein dsk2; PDBTitle: crystal structure of ufd2 in complex with the ubiquitin-like (ubl)2 domain of dsk2 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.			.	.	.	.	.	.	520	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		T	K	I	K	F	Y	Y	K	D	D	I	F	A	L	M	L	K	G	D	T	T	Y	K	E	L	R	S	K	I	A	P	R	I	D	T	.	.	D	N	F	K	L	Q	T	K	L
Query Conservation																																					.	.
Alig confidence																																					.	.
Template Conservation
Template Sequence		L	N	I	H	I	K	S	G	Q	D	K	W	E	V	N	V	A	P	E	S	T	V	L	Q	F	K	E	A	I	N	K	A	N	G	I	P	V	A	N	Q	R	L	I	Y	S	G
Template Known Secondary structure									S	S					B				T	T	S	B													S			S	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions