Job Description P29366 Confidence 45.10% Date Mon Jul 2 19:15:38 BST 2012 Rank 350 Aligned Residues 103 % Identity 20% Template c3m1uB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution Resolution 1.75 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure															.	.																																																															.	.	.
Query SS confidence															.	.																																																															.	.	.
Query Sequence		S	F	M	E	G	E	F	F	Y	V	S	G	D	.	.	E	K	D	W	Y	K	A	S	N	P	S	T	G	K	E	G	V	V	P	K	T	Y	F	E	V	F	D	R	T	K	P	S	S	V	N	G	S	N	S	S	S	R	K	V	T	N	D	S	L	N	M	G	S	L	Y	A	I	V	L	Y	D	F	.	.	.
Query Conservation															.	.																																																															.	.	.
Alig confidence															.	.									.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Conservation																									.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	W	X	G	T	P	V	F	V	G	H	A	T	A	D	R	A	W	L	Y	V	E	.	.	T	A	F	A	A	G	W	X	P	A	A	D	V	A	R	V	D	D	A	F	X	T	R	Y	E	S	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	I	L	R	D	D	T	S	L
Template Known Secondary structure					T	T										T	T	S	S						.	.		S	S							G	G	G														S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	T	T
Template Predicted Secondary structure																									.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																	.	.	.	.	240	.	.	.	.	.	.
			167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	K	A	E	K	A	D	E	L	T	T	Y	V	G	E	N	L	F	I	C	A	H	H	N	C	E	W	F	I	A	K	P	I	G	R	L	G	G	P	G	L	V	P	V	G	F	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		N	G	A	D	G	T	H	L	A	T	A	H	I	G	T	V	L	P	L	S	G	A	S	Q	V	G	R	T	V	L	V	P	V	R	A	P	E	G	H	A	V	V	V	P	V	L	L
Template Known Secondary structure				T	T	S								T	T										S	S											T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions