Job Description P29366 Confidence 98.77% Date Mon Jul 2 19:15:38 BST 2012 Rank 228 Aligned Residues 108 % Identity 17% Template c3iq2B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:sorting nexin-7; PDBTitle: human sorting nexin 7, phox homology (px) domain Resolution 1.70 Å

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		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.		300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																					.	.	.			.									.	.	.	.
Query SS confidence																					.	.	.			.									.	.	.	.
Query Sequence		D	G	E	L	L	V	K	A	S	V	E	S	F	G	L	E	D	E	K	.	.	.	Y	W	.	F	L	V	C	C	E	L	S	.	.	.	.	N	G	K	T	R	Q	L	K	R	Y	Y	Q	D	F	Y	D	L	Q	V	Q	L	L	D	A	F	P	A	E	A	G	K	L	R	D	A	G	G	Q	W	S	K	R	I
Query Conservation																					.	.	.			.									.	.	.	.
Alig confidence																					.	.	.			.									.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	D	L	K	D	L	F	I	T	V	D	E	P	E	S	H	V	T	T	I	E	T	F	I	T	Y	R	I	I	T	K	T	S	R	G	E	F	D	S	S	E	F	E	V	R	R	R	Y	Q	D	F	L	W	L	K	G	K	L	E	E	A	H	P	T	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																				S	S												S		S	S	S	S	S																									T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		351	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		M	P	Y	I	P	G	P	V	P	Y	V	T	.	.	N	S	I	T	K	K	R	K	E	D	L	N	I	Y	V	A	D	L	V	N	L	P	D	Y	I	S	R	S	E	M	V	H	S	L	F	V	V	L	N
Query Conservation														.	.
Alig confidence														.	.																								.
Template Conservation																																							.
Template Sequence		I	P	P	L	P	E	K	F	M	V	E	R	F	N	D	D	F	I	E	T	R	R	K	A	L	H	K	F	L	N	R	I	A	D	H	P	T	.	L	T	F	N	E	D	F	K	I	F	L	T	A	Q	A
Template Known Secondary structure												G	G	G																					T	S	T	T	.	G	G	G										T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions