Job Description P29366 Confidence 98.73% Date Mon Jul 2 19:15:38 BST 2012 Rank 231 Aligned Residues 107 % Identity 18% Template c3hpbA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:snx5 protein; PDBTitle: crystal structure of snx5-px domain in p212121 space group Resolution 2.19 Å

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		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		V	K	A	S	V	E	S	F	G	L	E	D	E	K	Y	W	F	L	V	C	C	E	L	S	.	.	.	.	N	G	K	T	R	Q	L	K	R	Y	Y	Q	D	F	Y	D	L	Q	V	Q	L	L	D	A	F	P	A	E	A	G	K	L	R	D	A	G	G	Q	W	S	K	R	I	M	P	Y	I	P	G	P	V	P
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.																												.					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	I	D	I	P	D	A	L	S	E	R	D	K	V	K	F	T	V	H	T	K	T	T	L	P	T	F	Q	S	P	E	F	S	V	T	R	Q	H	E	D	F	V	W	L	H	D	T	L	T	E	T	T	D	Y	.	A	G	L	I	.	.	.	.	.	.	.	.	.	.	.	I	P	P	A	P	T	K	P	D
Template Known Secondary structure													T	T													T	T	S	S		S																				T		G	G	G	.	T	T	S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.												90	.	.	.	.	.	.	.	.
		360	.																																.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	S	I	T	K	K	R	K	E	D	L	N	I	Y	V	A	D	L	V	N	L	P	D	Y	I	S	R	S	E	M	V	H	S	L	F	V	V	L	N	N	G	F
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																.
Template Conservation																																																								.																.
Template Sequence		F	D	G	P	R	E	K	X	Q	K	L	G	E	G	E	G	S	X	T	K	E	E	F	A	K	X	K	Q	E	L	E	A	E	Y	L	A	V	F	K	K	T	V	S	S	H	E	V	F	L	Q	R	L	S	S	.	H	P	V	L	S	K	D	R	N	F	H	V	F	L	E	.	Y	D	Q	D	L
Template Known Secondary structure															T	G	G	G	S																																					.		T	T	G	G	G										.			S		T
Template Predicted Secondary structure																																																								.																.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions